RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 CBLL1Q75N03 491 aa9.79□□□□□ -0.84
GARNL3-221ENST00000497703 C11orf74Q86VG3 221 aa9.79□□□□□ -0.84
GARNL3-221ENST00000497703 OSTM1Q86WC4 334 aa9.79□□□□□ -0.84
GARNL3-221ENST00000497703 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
GARNL3-221ENST00000497703 PCDHB4Q9Y5E5 795 aa9.79□□□□□ -0.84
GARNL3-221ENST00000497703 PTPDC1A2A3K4 754 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 BRINP1O60477 761 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 EFEMP2O95967 443 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 F2P00734 622 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 AMPD3Q01432 767 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 FIGNQ5HY92 759 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 FYB2Q5VWT5 728 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 IRF2BP1Q8IU81 584 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 UHMK1Q8TAS1 419 aaKnown RBP9.78□□□□□ -0.84
GARNL3-221ENST00000497703 MYOTQ9UBF9 498 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 B4GALT6Q9UBX8 382 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
GARNL3-221ENST00000497703 ZC3H12DA2A288 527 aaKnown RBP9.77□□□□□ -0.85
GARNL3-221ENST00000497703 H7C1D1 291 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 NKRFO15226 690 aaKnown RBP eCLIP9.77□□□□□ -0.85
GARNL3-221ENST00000497703 JAM2P57087 298 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 ZNF174Q15697 407 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 MILR1Q7Z6M3 343 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 PTRH1Q86Y79 214 aaKnown RBP9.77□□□□□ -0.85
GARNL3-221ENST00000497703 AFAP1L2Q8N4X5 818 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 YIPF4Q9BSR8 244 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 BOCQ9BWV1 1114 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 IFT22Q9H7X7 185 aa9.77□□□□□ -0.85
GARNL3-221ENST00000497703 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 TRAF5O00463 557 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 JUNBP17275 347 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-221ENST00000497703 SDHBP21912 280 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 IRAK1P51617 712 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 SEPT7Q16181 437 aaKnown RBP9.76□□□□□ -0.85
GARNL3-221ENST00000497703 HABP4Q5JVS0 413 aaKnown RBP9.76□□□□□ -0.85
GARNL3-221ENST00000497703 ZC3H14Q6PJT7 736 aaKnown RBP9.76□□□□□ -0.85
GARNL3-221ENST00000497703 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 PALD1Q9ULE6 856 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 ATP23Q9Y6H3 246 aa9.76□□□□□ -0.85
GARNL3-221ENST00000497703 ZEB2O60315 1214 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 KRT37O76014 449 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 GJA4P35212 333 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 MAPKAPK2P49137 400 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 HHIPL2Q6UWX4 724 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 RPTNQ6XPR3 784 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 KCTD1Q719H9 257 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 PASD1Q8IV76 773 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 SRPK3Q9UPE1 567 aa9.75□□□□□ -0.85
GARNL3-221ENST00000497703 SLC27A2O14975 620 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 TADA3O75528 432 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 MECP2P51608 486 aaKnown RBP9.74□□□□□ -0.85
GARNL3-221ENST00000497703 KPNA1P52294 538 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-221ENST00000497703 IRF9Q00978 393 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-221ENST00000497703 NXPE1Q8N323 547 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 FAM168AQ92567 244 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 SMURF1Q9HCE7 757 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 THG1LQ9NWX6 298 aaKnown RBP9.74□□□□□ -0.85
GARNL3-221ENST00000497703 APOBEC2Q9Y235 224 aaKnown RBP9.74□□□□□ -0.85
GARNL3-221ENST00000497703 SIT1Q9Y3P8 196 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 SMARCA2P51531 1590 aa9.74□□□□□ -0.85
GARNL3-221ENST00000497703 ZNF891A8MT65 544 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-221ENST00000497703 ALG1L2C9J202 215 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 SGSM2O43147 1006 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 AMY2AP04746 511 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 AMY2BP19961 511 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 CDK11BP21127 795 aaKnown RBP9.73□□□□□ -0.85
GARNL3-221ENST00000497703 PRR5P85299 388 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 DDX42Q86XP3 938 aaKnown RBP eCLIP9.73□□□□□ -0.85
GARNL3-221ENST00000497703 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 TSPAN17Q96FV3 270 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 ASH2LQ9UBL3 628 aa9.73□□□□□ -0.85
GARNL3-221ENST00000497703 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 THOC2Q8NI27 1593 aaKnown RBP9.72□□□□□ -0.85
GARNL3-221ENST00000497703 MAN2B1O00754 1011 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 DSG1Q02413 1049 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 TUSC3Q13454 348 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 SKOR2Q2VWA4 1001 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-221ENST00000497703 PLEKHN1Q494U1 663 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-221ENST00000497703 RNF219Q5W0B1 726 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-221ENST00000497703 CYB5RLQ6IPT4 315 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 STRA8Q7Z7C7 330 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 SMC1BQ8NDV3 1235 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 GPR101Q96P66 508 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-221ENST00000497703 CD244Q9BZW8 370 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 FAM53CQ9NYF3 392 aa9.72□□□□□ -0.85
GARNL3-221ENST00000497703 TCRBV5S4A2TA0A5A2 114 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 HRKO00198 91 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 SCDO00767 359 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 KCNK3O14649 394 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 CLASP2O75122 1294 aaKnown RBP9.71□□□□□ -0.86
GARNL3-221ENST00000497703 FKBP9O95302 570 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 LSSP48449 732 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 BTBD8Q5XKL5 378 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 FKBP9P1Q75LS8 142 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms