RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 STIM1Q13586 685 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 MCM6Q14566 821 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 STAMQ92783 540 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 CEP89Q96ST8 783 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 SV2BQ7L1I2 683 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 SMYD4Q8IYR2 804 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 FZD9O00144 591 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 TEX33O43247 280 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 COBLO75128 1261 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 ASNSP08243 561 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 TPM1P09493 284 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 EEF1GP26641 437 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 LONRF2Q1L5Z9 754 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 UNC13DQ70J99 1090 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
SNRNP200-208ENST00000497539 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 PSMA7O14818 248 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 TRIM66O15016 1216 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 PSMD2Q13200 908 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ZSCAN26Q16670 478 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 TTI2Q6NXR4 508 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ACER1Q8TDN7 264 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 LARP4BQ92615 738 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 LENG9Q96B70 501 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ABCB11O95342 1321 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ZBTB7AO95365 584 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 NEFHP12036 1026 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 ECE1P42892 770 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 STX17P56962 302 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 SPIRE1Q08AE8 756 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 TCP11X2Q5H9J9 407 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 TXLNBQ8N3L3 684 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 PANX2Q96RD6 677 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 EXOC1Q9NV70 894 aa12.83□□□□□ -0.36
SNRNP200-208ENST00000497539 STX10O60499 249 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 CCNE1P24864 410 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 MAP2K2P36507 400 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 SAMD3Q8N6K7 520 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 CCDC51Q96ER9 411 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 VEZTQ9HBM0 779 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 ABL1P00519 1130 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 PTGER2P43116 358 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 TRIM14Q14142 442 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 KRT31Q15323 416 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 IRF2BP1Q8IU81 584 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 ANKRD20A12PQ8NF67 263 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 GOLGA1Q92805 767 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
SNRNP200-208ENST00000497539 POTEMA6NI47 508 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 LPAR1Q92633 364 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 RABGGTAQ92696 567 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 P2RX5Q93086 422 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 PAPPA2Q9BXP8 1791 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 A0A1W2PQC6 194 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 MYMKA6NI61 221 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
SNRNP200-208ENST00000497539 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms