RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	RAVER1	Q8IY67	606 aa	Known RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	C7orf61	Q8IZ16	206 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	AGBL3	Q8NEM8	1001 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	MYLIP	Q8WY64	445 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	NINJ1	Q92982	152 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	ZBED3	Q96IU2	234 aa	Predicted RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	PAWR	Q96IZ0	340 aa	Known RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	TMX4	Q9H1E5	349 aa	Predicted RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	TTYH1	Q9H313	450 aa	Predicted RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	CCDC86	Q9H6F5	360 aa	Known RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	PHAX	Q9H814	394 aa	Known RBP	5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	CNNM2	Q9H8M5	875 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	HYPK	Q9NX55	129 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	GMIP	Q9P107	970 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	PCDHA4	Q9UN74	947 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	RIPOR2	Q9Y4F9	1068 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	XDH	P47989	1333 aa		5.37	□□□□□ -1.55
VPS52-222	ENST00000495981	SGPL1	O95470	568 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	IGKV5-2	P06315	115 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	GRK4	P32298	578 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	ADH7	P40394	386 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	STAT3	P40763	770 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	NCAPH	Q15003	741 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	GRIK5	Q16478	980 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	LONRF2	Q1L5Z9	754 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	TMEM201	Q5SNT2	666 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	DACT2	Q5SW24	774 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	CDCP2	Q5VXM1	449 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	CYFIP1	Q7L576	1253 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	EEPD1	Q7L9B9	569 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	NLRC3	Q7RTR2	1065 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	ALYREF	Q86V81	257 aa	Known RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	DHX37	Q8IY37	1157 aa	Known RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	CCDC191	Q8NCU4	936 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	KISS1R	Q969F8	398 aa	Predicted RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	MFSD3	Q96ES6	412 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	WDR89	Q96FK6	387 aa	Predicted RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	EXOC2	Q96KP1	924 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	EYA3	Q99504	573 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	RBSN	Q9H1K0	784 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	SEMA6B	Q9H3T3	888 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	SOX17	Q9H6I2	414 aa	Predicted RBP	5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	SENP2	Q9HC62	589 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	FRRS1L	Q9P0K9	344 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	SRRD	Q9UH36	339 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	GGA1	Q9UJY5	639 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	PRR12	Q9ULL5	1215 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	GABRQ	Q9UN88	632 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	ADAMTS8	Q9UP79	889 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	ATP8A1	Q9Y2Q0	1164 aa		5.36	□□□□□ -1.55
VPS52-222	ENST00000495981	DNAH12	Q6ZR08	3092 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	MYH13	Q9UKX3	1938 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	ADARB2-AS1	A8MUL3	147 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981		H3BRJ5	948 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	PDE8A	O60658	829 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	MAP4K4	O95819	1239 aa	Predicted RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	ARAF	P10398	606 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	CDC27	P30260	824 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	RPS8	P62241	208 aa	Known RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	WDR43	Q15061	677 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	CCDC152	Q4G0S7	254 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	BRDT	Q58F21	947 aa	Predicted RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	ODR4	Q5SWX8	454 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	ELMSAN1	Q6PJG2	1045 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	PODN	Q7Z5L7	613 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	RNF180	Q86T96	592 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	FERMT3	Q86UX7	667 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	FCHSD1	Q86WN1	690 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	TSPYL6	Q8N831	410 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	C8orf58	Q8NAV2	365 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	TTC9	Q92623	222 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	KIFC2	Q96AC6	838 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	OPTN	Q96CV9	577 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	MYD88	Q99836	296 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	METTL22	Q9BUU2	404 aa	Predicted RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	DEFB129	Q9H1M3	183 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	GREM2	Q9H772	168 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	CWC25	Q9NXE8	425 aa	Predicted RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	SUSD2	Q9UGT4	822 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	CPA4	Q9UI42	421 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	PHF24	Q9UPV7	400 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	LAS1L	Q9Y4W2	734 aa	Known RBP	5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	TACC3	Q9Y6A5	838 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	SNCAIP	Q9Y6H5	919 aa		5.35	□□□□□ -1.55
VPS52-222	ENST00000495981	WDFY4	Q6ZS81	3184 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	CFAP54	Q96N23	3096 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	CCL15-CCL14	A0A0B4J2E2	113 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	FAM86C2P	A6NEL3	165 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	NEURL1B	A8MQ27	555 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	GSG1L2	A8MUP6	293 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	BTBD19	C9JJ37	291 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	APAF1	O14727	1248 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	TLR2	O60603	784 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	RFPL3	O75679	317 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	CAPNS1	P04632	268 aa		5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	MYCLP1	P12525	358 aa	Predicted RBP	5.34	□□□□□ -1.55
VPS52-222	ENST00000495981	ELN	P15502	786 aa		5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms