RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 KMT5AQ9NQR1 393 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 RIPOR2Q9Y4F9 1068 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 ADGRL3Q9HAR2 1447 aa20.77■□□□□ 0.92
COL27A1-207ENST00000494090 SUN1O94901 812 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 HSPA6P17066 643 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 ALCAMQ13740 583 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 SURF1Q15526 300 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 CEP120Q8N960 986 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 FAM133AQ8N9E0 248 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 ZNF579Q8NAF0 562 aaKnown RBP20.77■□□□□ 0.91
COL27A1-207ENST00000494090 LRRC8CQ8TDW0 803 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 HAUS8Q9BT25 410 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 STK36Q9NRP7 1315 aa20.77■□□□□ 0.91
COL27A1-207ENST00000494090 ESYT2A0FGR8 921 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 H7C0C1 242 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 ATP5OP48047 213 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 STAG1Q8WVM7 1258 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 PGBD1Q96JS3 809 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 BPIFA3Q9BQP9 254 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 BRIP1Q9BX63 1249 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 NDST4Q9H3R1 872 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 TTC19Q6DKK2 380 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-207ENST00000494090 CCDC197Q8NCU1 140 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 EXOC4Q96A65 974 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 PI4KBQ9UBF8 816 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 TXNDC9O14530 226 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 MCAMP43121 646 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 IL9RQ01113 521 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 MUM1Q2TAK8 710 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 CAPN12Q6ZSI9 719 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 SEPT10Q9P0V9 454 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 STAT2P52630 851 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 PTPN22Q9Y2R2 807 aa20.76■□□□□ 0.91
COL27A1-207ENST00000494090 GSTA1P08263 222 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 GSTA2P09210 222 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 USP17L8P0C7I0 530 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 RBBP5Q15291 538 aaKnown RBP20.75■□□□□ 0.91
COL27A1-207ENST00000494090 KAZNQ674X7 775 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 CLEC17AQ6ZS10 378 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 COA7Q96BR5 231 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 ZNF653Q96CK0 615 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 SCYL1Q96KG9 808 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 AKT3Q9Y243 479 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 MED7O43513 233 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 ATP8B3O60423 1300 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 CACNB1Q02641 598 aaPredicted RBP20.75■□□□□ 0.91
COL27A1-207ENST00000494090 DGKHQ86XP1 1220 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 TRIM56Q9BRZ2 755 aaKnown RBP20.75■□□□□ 0.91
COL27A1-207ENST00000494090 TACO1Q9BSH4 297 aaKnown RBP20.75■□□□□ 0.91
COL27A1-207ENST00000494090 ANAPC5Q9UJX4 755 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 IGKV5-2P06315 115 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 MAPK4P31152 587 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 MECOMQ03112 1051 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 SYDE2Q5VT97 1194 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 ALS2CLQ60I27 953 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 SNX25Q9H3E2 840 aa20.75■□□□□ 0.91
COL27A1-207ENST00000494090 CLRN2A0PK11 232 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 CDC37Q16543 378 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 HVCN1Q96D96 273 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 SLC12A6Q9UHW9 1150 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 FTCDO95954 541 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 S100BP04271 92 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 KRT10P13645 584 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 SLC16A2P36021 539 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 GCNT4Q9P109 453 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 INO80B-WBP1J3KQ70 363 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 PLA2G4BP0C869 781 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 INO80BQ9C086 356 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 CYP2D7A0A087X1C5 515 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 ARHGAP42A6NI28 874 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 PPP4R3CPQ6ZMV5 832 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 RSRC2Q7L4I2 434 aaKnown RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 FOXP4Q8IVH2 680 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 RRP15Q9Y3B9 282 aaKnown RBP20.74■□□□□ 0.91
COL27A1-207ENST00000494090 WHAMMQ8TF30 809 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 DYNLL2Q96FJ2 89 aa20.74■□□□□ 0.91
COL27A1-207ENST00000494090 CLIC2O15247 247 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 SORBS3O60504 671 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 EPHA10Q5JZY3 1008 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 ALDH8A1Q9H2A2 487 aaPredicted RBP20.73■□□□□ 0.91
COL27A1-207ENST00000494090 MRPL47Q9HD33 250 aaKnown RBP20.73■□□□□ 0.91
COL27A1-207ENST00000494090 ABCC3O15438 1527 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 ECEL1O95672 775 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 CXCR5P32302 372 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 IFRD2Q12894 506 aaPredicted RBP20.73■□□□□ 0.91
COL27A1-207ENST00000494090 SNCBQ16143 134 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 TRIM42Q8IWZ5 723 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 SPICE1Q8N0Z3 855 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 CEP170P1Q96L14 293 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.73■□□□□ 0.91
COL27A1-207ENST00000494090 GFPT2O94808 682 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 PLTPP55058 493 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 ASPHQ12797 758 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 EFCAB13Q8IY85 973 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 BAG5Q9UL15 447 aa20.73■□□□□ 0.91
COL27A1-207ENST00000494090 RXRBP28702 533 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 CASP8Q14790 479 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms