RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TBX3O15119 743 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 TBC1D8O95759 1140 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
VCP-207ENST00000493886 STAT3P40763 770 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 POTEBQ6S5H4 581 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 LENG9Q96B70 501 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 PIM2Q9P1W9 311 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 FAM86B1E9PN63 330 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
VCP-207ENST00000493886 FAM86B2P0C5J1 330 aa15.29■□□□□ 0.04
VCP-207ENST00000493886 MTIF2P46199 727 aaKnown RBP15.29■□□□□ 0.04
VCP-207ENST00000493886 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
VCP-207ENST00000493886 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
VCP-207ENST00000493886 PIK3CDO00329 1044 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 CIITAP33076 1130 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 ERVK-24P63145 666 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 COASYQ13057 564 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 TRAF1Q13077 416 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 ZBED3Q96IU2 234 aaPredicted RBP15.28■□□□□ 0.04
VCP-207ENST00000493886 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 TTC26A0AVF1 554 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 MED24O75448 989 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 CAP2P40123 477 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 SPIRE1Q08AE8 756 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
VCP-207ENST00000493886 WNT10BO00744 389 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 KIF5CO60282 957 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 OAS2P29728 719 aaKnown RBP15.27■□□□□ 0.04
VCP-207ENST00000493886 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
VCP-207ENST00000493886 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 CHURC1Q8WUH1 139 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 GOLGA1Q92805 767 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.04
VCP-207ENST00000493886 PANK4Q9NVE7 773 aa15.27■□□□□ 0.04
VCP-207ENST00000493886 CHMP4BP1P59074 171 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 LRRC41Q15345 812 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 MIIPQ5JXC2 388 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 CIAPIN1Q6FI81 312 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 CCDC174Q6PII3 467 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 RSRC2Q7L4I2 434 aaKnown RBP15.27■□□□□ 0.03
VCP-207ENST00000493886 SLC35F6Q8N357 371 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 GLIS3Q8NEA6 775 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 FAM20AQ96MK3 541 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.03
VCP-207ENST00000493886 CYP3A4P08684 503 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 TGFB2P61812 414 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 LRRC63Q05C16 580 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.03
VCP-207ENST00000493886 OR8K1Q8NGG5 319 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 ERMNQ8TAM6 284 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 SLF1Q9BQI6 1058 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 RANBP17Q9H2T7 1088 aaKnown RBP15.27■□□□□ 0.03
VCP-207ENST00000493886 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 CAPN11Q9UMQ6 739 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 TFR2Q9UP52 801 aa15.27■□□□□ 0.03
VCP-207ENST00000493886 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 FAM26FQ5R3K3 315 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 POTEFA5A3E0 1075 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.03
VCP-207ENST00000493886 MSH4O15457 936 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 FGFR1OPO95684 399 aaKnown RBP15.26■□□□□ 0.03
VCP-207ENST00000493886 CFBP00751 764 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 ZNF76P36508 570 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 POTEGQ6S5H5 508 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 POTEEQ6S8J3 1075 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 CATSPER3Q86XQ3 398 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 CCDC65Q8IXS2 484 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 MYOCDQ8IZQ8 938 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 GPATCH11Q8N954 259 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 CYP2W1Q8TAV3 490 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 GLIS2Q9BZE0 524 aaPredicted RBP15.26■□□□□ 0.03
VCP-207ENST00000493886 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
VCP-207ENST00000493886 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 ZBTB7AO95365 584 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 CYP11B2P19099 503 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 MAP3K10Q02779 954 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
VCP-207ENST00000493886 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 DNAJC7Q99615 494 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 TSG101Q99816 390 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 NUP58Q9BVL2 599 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 TAOK3Q9H2K8 898 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 TRIM10Q9UDY6 481 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 PLA2G6O60733 806 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 RPA1P27694 616 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms