RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 GATA6Q92908 595 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
LRCH3-218ENST00000493726 ACSS3Q9H6R3 686 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 ZNF112Q9UJU3 913 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 MAST2Q6P0Q8 1798 aa9.34□□□□□ -0.91
LRCH3-218ENST00000493726 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-218ENST00000493726 WNT11O96014 354 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 FOSL1P15407 271 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 MAPK1P28482 360 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 TNNI2P48788 182 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 IRAK1P51617 712 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 AP3B2Q13367 1082 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 CDC42EP5Q6NZY7 148 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 ANKRD13AQ8IZ07 590 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 FAM151AQ8WW52 585 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 WNK4Q96J92 1243 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 TMEM39BQ9GZU3 492 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 HMG20BQ9P0W2 317 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
LRCH3-218ENST00000493726 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
LRCH3-218ENST00000493726 MYH2Q9UKX2 1941 aa9.33□□□□□ -0.92
LRCH3-218ENST00000493726 GPR75-ASB3A0A0A6YYF3 556 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 MANSC4A6NHS7 340 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-218ENST00000493726 FRAT2O75474 233 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-218ENST00000493726 LDHBP07195 334 aaKnown RBP9.32□□□□□ -0.92
LRCH3-218ENST00000493726 RBM5P52756 815 aaKnown RBP eCLIP9.32□□□□□ -0.92
LRCH3-218ENST00000493726 RHBDL3P58872 404 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 SREBF2Q12772 1141 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 BCO2Q9BYV7 579 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-218ENST00000493726 FZD1Q9UP38 647 aa9.32□□□□□ -0.92
LRCH3-218ENST00000493726 DOCK2Q92608 1830 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 CYP26A1O43174 497 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 ENTPD3O75355 529 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 BRD1O95696 1058 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 MCAMP43121 646 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 MAP7Q14244 749 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 RPS26P11Q5JNZ5 115 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 NOL9Q5SY16 702 aaKnown RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 TMED8Q6PL24 325 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 SIRT2Q8IXJ6 389 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 SPATA5Q8NB90 893 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 NSUN4Q96CB9 384 aaKnown RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 HOOK2Q96ED9 719 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 ZCCHC17Q9NP64 241 aaKnown RBP9.31□□□□□ -0.92
LRCH3-218ENST00000493726 SNCAIPQ9Y6H5 919 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 FPGT-TNNI3KV9GXZ4 949 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 FOCADQ5VW36 1801 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 MROH7-TTC4A0A0A0MT08 1334 aa9.31□□□□□ -0.92
LRCH3-218ENST00000493726 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 TMPRSS2O15393 492 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 ZNF862O60290 1169 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 UQCRFS1P1P0C7P4 283 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 CACNB3P54284 484 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 SOX10P56693 466 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 MECOMQ03112 1051 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 VGLL4Q14135 290 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 SPTY2D1Q68D10 685 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 NXPE4Q6UWF7 544 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 ZNF765Q7L2R6 523 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 ITPRIPQ8IWB1 547 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 RPAP2Q8IXW5 612 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 EAF2Q96CJ1 260 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 PTPN18Q99952 460 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 LRRC4CQ9HCJ2 640 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 DBNLQ9UJU6 430 aaKnown RBP9.3□□□□□ -0.92
LRCH3-218ENST00000493726 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 DDX19BQ9UMR2 479 aa9.3□□□□□ -0.92
LRCH3-218ENST00000493726 CENPFP49454 3210 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 SIPA1L1O43166 1804 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 TAL1P17542 331 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-218ENST00000493726 DSC3Q14574 896 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.29□□□□□ -0.92
LRCH3-218ENST00000493726 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
LRCH3-218ENST00000493726 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 R3HDMLQ9H3Y0 253 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 C1GALT1Q9NS00 363 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
LRCH3-218ENST00000493726 PHIPQ8WWQ0 1821 aa9.28□□□□□ -0.92
LRCH3-218ENST00000493726 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
LRCH3-218ENST00000493726 BRCA2P51587 3418 aa9.28□□□□□ -0.92
LRCH3-218ENST00000493726 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
LRCH3-218ENST00000493726 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
LRCH3-218ENST00000493726 PLCB3Q01970 1234 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms