RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 FKBP3Q00688 224 aaKnown RBP11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 DCAF15Q66K64 600 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 KRT26Q7Z3Y9 468 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 TTYH3Q9C0H2 523 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 DNAI1Q9UI46 699 aa11.99□□□□□ -0.49
PHACTR4-204ENST00000493669 TTC26A0AVF1 554 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 PES1O00541 588 aaKnown RBP11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 CEP55Q53EZ4 464 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 MICALL2Q8IY33 904 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 GLIS2Q9BZE0 524 aaPredicted RBP11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 WDR11Q9BZH6 1224 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 PSMD10O75832 226 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 EYA4O95677 639 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 KRT18P05783 430 aaKnown RBP11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 TAL1P17542 331 aaPredicted RBP11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 USP14P54578 494 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 MEA1Q16626 185 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 VWA3BQ502W6 1294 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 ARHGAP27Q6ZUM4 889 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 NIPA1Q7RTP0 329 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 CCDC84Q86UT8 332 aaPredicted RBP11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
PHACTR4-204ENST00000493669 BCRP11274 1271 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ERVK-24P63145 666 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZBED6P86452 979 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 MTF1Q14872 753 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 EDRF1Q3B7T1 1238 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ARSHQ5FYA8 562 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 OTOP1Q7RTM1 612 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZC3H3Q8IXZ2 948 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 EIF2AK1Q9BQI3 630 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 RPTORQ8N122 1335 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 MEIS1O00470 390 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 CDK17Q00537 523 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 HSD17B14Q9BPX1 270 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 DESI2Q9BSY9 194 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 FBXO28Q9NVF7 368 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 CNOT7Q9UIV1 285 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNF536O15090 1300 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 RNF225M0QZC1 329 aaPredicted RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 CASQ1P31415 396 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 INPP5BP32019 993 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 PRELPP51888 382 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 GNG11P61952 73 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 GIT2Q14161 759 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 CYP2W1Q8TAV3 490 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 RIT2Q99578 217 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 EDEM3Q9BZQ6 932 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNHIT6Q9NWK9 470 aaKnown RBP11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 MYO1AQ9UBC5 1043 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 COL4A3BPQ9Y5P4 624 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
PHACTR4-204ENST00000493669 GAP43P17677 238 aa11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 MRPL44Q9H9J2 332 aaKnown RBP11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 SLC38A10Q9HBR0 1119 aa11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 ZNF215Q9UL58 517 aaPredicted RBP11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 SMCHD1A6NHR9 2005 aa11.96□□□□□ -0.49
PHACTR4-204ENST00000493669 RBBP6Q7Z6E9 1792 aaKnown RBP11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 GAS7O60861 476 aa11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 EGFRP00533 1210 aa11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 KCND2Q9NZV8 630 aa11.96□□□□□ -0.5
PHACTR4-204ENST00000493669 EML1O00423 815 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 KIF5CO60282 957 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PABPC4Q13310 644 aaKnown RBP eCLIP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 LRRC41Q15345 812 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF662Q6ZS27 426 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 SCFD1Q8WVM8 642 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TSC1Q92574 1164 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 MXRA8Q9BRK3 442 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TEKT3Q9BXF9 490 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PPP1R9AQ9ULJ8 1098 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms