RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DEPTORQ8TB45 409 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 RUFY2Q8WXA3 655 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 CATSPER2Q96P56 530 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 NUP88Q99567 741 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ELAC2Q9BQ52 826 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 SELENOSQ9BQE4 189 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 EIF2AQ9BY44 585 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 TRIM64CA6NLI5 447 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ABL1P00519 1130 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 CHGBP05060 677 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 POTEIP0CG38 1075 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 EPB41P11171 864 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 SKIP12755 728 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ATP6V1C1P21283 382 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 VPS41P49754 854 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 PMS2P54278 862 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 COG7P83436 770 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 DHX9Q08211 1270 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 SEPT6Q14141 434 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 NCAPHQ15003 741 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 C8orf74Q6P047 294 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 DAAM2Q86T65 1068 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ZNF713Q8N859 430 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 KCNN1Q92952 543 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 EVI5LQ96CN4 794 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 SRPK1Q96SB4 655 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 CCT7Q99832 543 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 TAF1DQ9H5J8 278 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 CTTNBP2NLQ9P2B4 639 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 TDRKHQ9Y2W6 561 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 PPIP5K2O43314 1243 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 TPPPO94811 219 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ATP1A1P05023 1023 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 UBTFL6P0CB48 400 aaPredicted RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ZCCHC18P0CG32 403 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 MSH2P43246 934 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 DNA2P51530 1060 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 ANKRD1Q15327 319 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 EZH2Q15910 746 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 SGSM1Q2NKQ1 1148 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 CLASRPQ8N2M8 674 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 AENQ8WTP8 325 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 UCMAQ8WVF2 138 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 MKS1Q9NXB0 559 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
VPS13B-205ENST00000493587 NFE2L3Q9Y4A8 694 aa7.48□□□□□ -1.21
VPS13B-205ENST00000493587 RFX7Q2KHR2 1363 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 MED23Q9ULK4 1368 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 SPECC1L-ADORA2AF8WAN1 911 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 ZNF185O15231 689 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PDE5AO76074 875 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 HSPA8P11142 646 aaKnown RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PAFAH1B1P43034 410 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 GALK1P51570 392 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 ZNF268Q14587 947 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CCDC152Q4G0S7 254 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CCSAPQ6IQ19 270 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CNTROBQ8N137 903 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LINS1Q8NG48 757 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 HDAC7Q8WUI4 952 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CENPKQ9BS16 269 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LRRC1Q9BTT6 524 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 NAA15Q9BXJ9 866 aaKnown RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 SLC52A2Q9HAB3 445 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 EFR3BQ9Y2G0 817 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 RBL2Q08999 1139 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 RESTQ13127 1097 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PACS1Q6VY07 963 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 TRPM8Q7Z2W7 1104 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 UBE2Q1Q7Z7E8 422 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PPFIBP2Q8ND30 876 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LENG1Q96BZ8 264 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CTAGE1Q96RT6 745 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LBHD1Q9BQE6 289 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 LRRC27Q9C0I9 530 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 MIS12Q9H081 205 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 ZBTB21Q9ULJ3 1066 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 GNA14O95837 355 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 GSTA1P08263 222 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 IGHMBP2P38935 993 aaKnown RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PLOD1Q02809 727 aaPredicted RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 SLC2A7Q6PXP3 512 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 EXOC3L1Q86VI1 746 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 RAPGEF5Q92565 580 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 ANKRD27Q96NW4 1050 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 NUDCD1Q96RS6 583 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 NSRP1Q9H0G5 558 aaKnown RBP7.47□□□□□ -1.21
VPS13B-205ENST00000493587 EURLQ9NYK6 297 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 TRIM10Q9UDY6 481 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 NFU1Q9UMS0 254 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 PCDHA7Q9UN72 937 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms