RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 GRIN2CQ14957 1233 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 IQSEC1Q6DN90 963 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 XRRA1Q6P2D8 792 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.294e-8■■■□□ 18.7
CTSA-209ENST00000493522 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 ZNF576Q9H609 170 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
CTSA-209ENST00000493522 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
CTSA-209ENST00000493522 MYADML2A6NDP7 307 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 ARIH2O95376 493 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 ASGR1P07306 291 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 ZNF76P36508 570 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 GJA9P57773 515 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 NPY5RQ15761 445 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 TMEM63BQ5T3F8 832 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 KRT40Q6A162 431 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
CTSA-209ENST00000493522 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 NLRX1Q86UT6 975 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 COPS5Q92905 334 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
CTSA-209ENST00000493522 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
CTSA-209ENST00000493522 XIRP2A4UGR9 3374 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 KAT6AQ92794 2004 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 ARVCFO00192 962 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTSA-209ENST00000493522 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
CTSA-209ENST00000493522 FIBPO43427 364 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 SORBS3O60504 671 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 RGS20O76081 388 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 GH1P01241 217 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 MMP1P03956 469 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 GJB2P29033 226 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 CDK7P50613 346 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTSA-209ENST00000493522 TJAP1Q5JTD0 557 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 SNX21Q969T3 373 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 INPP4AQ96PE3 977 aaPredicted RBP13.19□□□□□ -0.3
CTSA-209ENST00000493522 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
CTSA-209ENST00000493522 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
CTSA-209ENST00000493522 PRDM6Q9NQX0 595 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
CTSA-209ENST00000493522 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
CTSA-209ENST00000493522 CHD9Q3L8U1 2897 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 SCN10AQ9Y5Y9 1956 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 M0R2N6 131 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 DYNC1LI2O43237 492 aaPredicted RBP13.18□□□□□ -0.3
CTSA-209ENST00000493522 UBA1P22314 1058 aaKnown RBP13.18□□□□□ -0.3
CTSA-209ENST00000493522 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
CTSA-209ENST00000493522 BEX3Q00994 111 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 MTMR1Q13613 665 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 NONOQ15233 471 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTSA-209ENST00000493522 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 DIS3L2Q8IYB7 885 aaKnown RBP13.18□□□□□ -0.3
CTSA-209ENST00000493522 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 PBX4Q9BYU1 374 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
CTSA-209ENST00000493522 UBIAD1Q9Y5Z9 338 aa13.18□□□□□ -0.3
CTSA-209ENST00000493522 GGPS1O95749 300 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CSF2RAP15509 400 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 ITGB5P18084 799 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 ICAM3P32942 547 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 ARHGAP1Q07960 439 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 NR5A1Q13285 461 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CUL4AQ13619 759 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
CTSA-209ENST00000493522 FSCN1Q16658 493 aaKnown RBP13.17□□□□□ -0.3
CTSA-209ENST00000493522 INF2Q27J81 1249 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 TBCKQ8TEA7 893 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
CTSA-209ENST00000493522 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 Q9Y3F1 56 aa13.17□□□□□ -0.3
CTSA-209ENST00000493522 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms