RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 CTDNEP1O95476 244 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 ZNF286BP0CG31 522 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 RAG1P15918 1043 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 ZNF76P36508 570 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 KAT2BQ92831 832 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 KCNH7Q9NS40 1196 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 NFASCO94856 1347 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 HAS3O00219 553 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 MEIS1O00470 390 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 SORBS3O60504 671 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 TIMP1P01033 207 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 PSEN2P49810 448 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 NSUN7Q8NE18 718 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 BADQ92934 168 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 GPR20Q99678 358 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
CDC42SE1-206ENST00000492796 FAM86B1E9PN63 330 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 M0R2N6 131 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 ST18O60284 1047 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 ATP9AO75110 1047 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 LGALS2P05162 132 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 FAM86B2P0C5J1 330 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 ITGB8P26012 769 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 CIITAP33076 1130 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 USP11P51784 963 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 MFSD10Q14728 455 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 NPY5RQ15761 445 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 TDHQ8IZJ6 230 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 CYP2W1Q8TAV3 490 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 SDF4Q9BRK5 362 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 C16orf70Q9BSU1 422 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 AGO4Q9HCK5 861 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 JPH1Q9HDC5 661 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE1-206ENST00000492796 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 H3BRB1 525 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 ARP10275 920 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 FPGSQ05932 587 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 KRT25Q7Z3Z0 450 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 ALG1Q9BT22 464 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 SLC9A2Q9UBY0 812 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
CDC42SE1-206ENST00000492796 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 SP4Q02446 784 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 NONOQ15233 471 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 PTGISQ16647 500 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 BRMS1Q9HCU9 246 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 TBC1D22BQ9NU19 505 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 HDAC6Q9UBN7 1215 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
CDC42SE1-206ENST00000492796 CCDC194A0A1B0GVG4 234 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms