RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GRXCR1A8MXD5 290 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 LGALS2P05162 132 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 ZNF76P36508 570 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 SP2Q02086 613 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 IKBKEQ14164 716 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 PPP2R2DQ66LE6 453 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 TSPYL2Q9H2G4 693 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 TCEAL9Q9UHQ7 104 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 LCTP09848 1927 aa18.96■□□□□ 0.63
PDLIM2-217ENST00000491330 hCG_1642624A0A1W2PR95 340 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 CAND2O75155 1236 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 CKBP12277 381 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 HSPA4P34932 840 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 SP4Q02446 784 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 RBL2Q08999 1139 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 UTP14CQ5TAP6 766 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 CNKSR3Q6P9H4 555 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 RSPH3Q86UC2 560 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 PPP1R13LQ8WUF5 828 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 SEPT1Q8WYJ6 367 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 KCNB2Q92953 911 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 SDF4Q9BRK5 362 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 C16orf70Q9BSU1 422 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 AZI2Q9H6S1 392 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 RIC8AQ9NPQ8 531 aa18.95■□□□□ 0.62
PDLIM2-217ENST00000491330 ABHD14A-ACY1A0A1B0GW23 586 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 SMCO2A6NFE2 343 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 THPOP40225 353 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 GRIN2CQ14957 1233 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 ADCK5Q3MIX3 580 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 Q6ZUG5 572 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 SKAP1Q86WV1 359 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 RASEFQ8IZ41 740 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 GLG1Q92896 1179 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 GPR20Q99678 358 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 C6orf50Q9HD87 102 aa18.94■□□□□ 0.62
PDLIM2-217ENST00000491330 RSPH10B2B2RC85 870 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 DLL1O00548 723 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 RPLP2P05387 115 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 RSPH10BP0C881 870 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 IGFBP4P22692 258 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 GNA11P29992 359 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 PBX2P40425 430 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 UBE2SQ16763 222 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 CPLX2Q6PUV4 134 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 BRF1Q92994 677 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 SMARCAD1Q9H4L7 1026 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 JADE2Q9NQC1 790 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 ERAP1Q9NZ08 941 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 NRCAMQ92823 1304 aa18.93■□□□□ 0.62
PDLIM2-217ENST00000491330 GTPBP6O43824 516 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 SMIM10L2AP0DMW4 78 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 SMIM10L2BP0DMW5 78 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 WWC2Q6AWC2 1192 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 SERINC5Q86VE9 423 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 FBXL16Q8N461 479 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 UBIAD1Q9Y5Z9 338 aa18.92■□□□□ 0.62
PDLIM2-217ENST00000491330 BAZ2BQ9UIF8 2168 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 TLL1O43897 1013 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 RPS6KB1P23443 525 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 TCF7P36402 384 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 HERC6Q8IVU3 1022 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 TRIM22Q8IYM9 498 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 CCDC148Q8NFR7 591 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 RNPEPQ9H4A4 650 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 PRDM12Q9H4Q4 367 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 JPH1Q9HDC5 661 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 SNX14Q9Y5W7 946 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 CNTNAP5Q8WYK1 1306 aa18.91■□□□□ 0.62
PDLIM2-217ENST00000491330 SCN10AQ9Y5Y9 1956 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 CPLX1O14810 134 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 LGR5O75473 907 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 AMHP03971 560 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 SCG2P13521 617 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 ITGB5P18084 799 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 RABGGTBP53611 331 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 ARHGAP4P98171 946 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 APOBRQ0VD83 1088 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 PFKFB3Q16875 520 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 ZNF618Q5T7W0 954 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 TAF2Q6P1X5 1199 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 SEPT8Q92599 483 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 SYMPKQ92797 1274 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 ANO3Q9BYT9 981 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 SETD4Q9NVD3 440 aa18.9■□□□□ 0.62
PDLIM2-217ENST00000491330 RRN3P2A6NIE6 340 aa18.89■□□□□ 0.61
PDLIM2-217ENST00000491330 CXCL10P02778 98 aa18.89■□□□□ 0.61
PDLIM2-217ENST00000491330 CEP55Q53EZ4 464 aa18.89■□□□□ 0.61
PDLIM2-217ENST00000491330 IL27Q8NEV9 243 aa18.89■□□□□ 0.61
PDLIM2-217ENST00000491330 PKD2L1Q9P0L9 805 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms