RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PDE4DQ08499 809 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 STK4Q13043 487 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 PCNX4Q63HM2 1172 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 NFE2L3Q9Y4A8 694 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 BRCA2P51587 3418 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 WDR90Q96KV7 1748 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 TBX3O15119 743 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 CAVIN2O95810 425 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 OAZ1P54368 228 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 MYL5Q02045 173 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 DRC7Q8IY82 874 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 MLKLQ8NB16 471 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 ZHX3Q9H4I2 956 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 SAMM50Q9Y512 469 aa15.58■□□□□ 0.09
SMPD4-219ENST00000491128 CCL15-CCL14A0A0B4J2E2 113 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 RGS20O76081 388 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 ZNF75DP51815 510 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 PMS1P54277 932 aaKnown RBP15.58■□□□□ 0.08
SMPD4-219ENST00000491128 LRRC41Q15345 812 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 CCL15Q16663 113 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 C2orf69Q8N8R5 385 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 MS4A4AQ96JQ5 239 aa15.58■□□□□ 0.08
SMPD4-219ENST00000491128 ATP2A1O14983 1001 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 SLITRK3O94933 977 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 IFNKQ9P0W0 207 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 UBIAD1Q9Y5Z9 338 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 PAPPA2Q9BXP8 1791 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 TMEM150BA6NC51 233 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 BTBD19C9JJ37 291 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 DHX15O43143 795 aaKnown RBP15.57■□□□□ 0.08
SMPD4-219ENST00000491128 ITGBL1O95965 494 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-219ENST00000491128 HUNKP57058 714 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 FAM43AQ8N2R8 423 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 SMCR8Q8TEV9 937 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-219ENST00000491128 UBE2Q2Q8WVN8 375 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 BPIFA3Q9BQP9 254 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 PORCNQ9H237 461 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 AGO4Q9HCK5 861 aaKnown RBP15.57■□□□□ 0.08
SMPD4-219ENST00000491128 JADE2Q9NQC1 790 aa15.57■□□□□ 0.08
SMPD4-219ENST00000491128 PARP14Q460N5 1801 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 PDHXO00330 501 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 GHRHRQ02643 423 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 GRM1Q13255 1194 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 FASTKD5Q7L8L6 764 aaKnown RBP15.56■□□□□ 0.08
SMPD4-219ENST00000491128 GPBP1Q86WP2 473 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 ANKRD13CQ8N6S4 541 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
SMPD4-219ENST00000491128 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 BMP2KQ9NSY1 1161 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-219ENST00000491128 PTPRFP10586 1907 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 SFI1A8K8P3 1242 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 RPA1P27694 616 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 SEMA3FQ13275 785 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 ARSHQ5FYA8 562 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 ZNF658Q5TYW1 1059 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-219ENST00000491128 HAUS3Q68CZ6 603 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 VSIG10LQ86VR7 867 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 PTPN18Q99952 460 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 TEKT3Q9BXF9 490 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 XPO4Q9C0E2 1151 aaKnown RBP15.56■□□□□ 0.08
SMPD4-219ENST00000491128 EXOC1Q9NV70 894 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 STK17AQ9UEE5 414 aa15.56■□□□□ 0.08
SMPD4-219ENST00000491128 SMTNL1A8MU46 457 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 PTGS1P23219 599 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 RIOX2Q8IUF8 465 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 ERMNQ8TAM6 284 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 NELFBQ8WX92 580 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-219ENST00000491128 HSD17B14Q9BPX1 270 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 CUEDC2Q9H467 287 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 MYPNQ86TC9 1320 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 SETQ01105 290 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-219ENST00000491128 AMPD3Q01432 767 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 SEPT14Q6ZU15 432 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 KIAA0895Q8NCT3 520 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 NT5C3AQ9H0P0 336 aa15.55■□□□□ 0.08
SMPD4-219ENST00000491128 RSPH10B2B2RC85 870 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 SERPINC1P01008 464 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 RSPH10BP0C881 870 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 OSBPP22059 807 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 FANCCQ00597 558 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 PPP2R5CQ13362 524 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 ARID5BQ14865 1188 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 DNAJC19Q96DA6 116 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 DNM3Q9UQ16 869 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 SYNRGQ9UMZ2 1314 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 IKBKBO14920 756 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 RHOBTB3O94955 611 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 CCNE2O96020 404 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms