RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ARHGAP1Q07960 439 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 CDHR1Q96JP9 859 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
CACNA1C-227ENST00000491104 SYNRGQ9UMZ2 1314 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 HTTP42858 3142 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 CHMP2AO43633 222 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 GAS7O60861 476 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 DUSP11O75319 330 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 TGFB3P10600 412 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 RARBP10826 455 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 BEX3Q00994 111 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 NEDD9Q14511 834 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 PTPAQ15257 358 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 LHX8Q68G74 356 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 ZNF396Q96N95 335 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 MTMR9Q96QG7 549 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-227ENST00000491104 NFASCO94856 1347 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 TBX3O15119 743 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 NKRFO15226 690 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 CTAGE5O15320 804 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 MAFGO15525 162 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 PSMD10O75832 226 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 CCNE2O96020 404 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 C6orf222P0C671 652 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 ATP2C1P98194 919 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 SPATA33Q96N06 139 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 SENP7Q9BQF6 1050 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 XPNPEP3Q9NQH7 507 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 SLC9A2Q9UBY0 812 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 VAV3Q9UKW4 847 aa12.16□□□□□ -0.46
CACNA1C-227ENST00000491104 POTEMA6NI47 508 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 EML1O00423 815 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 TECP42680 631 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 GJA9P57773 515 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 GRIN1Q05586 938 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 STK38Q15208 465 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 IL17AQ16552 155 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 NCAPH2Q6IBW4 605 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 METTL7BQ6UX53 244 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 FAM20AQ96MK3 541 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 GPR20Q99678 358 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 AP5M1Q9H0R1 490 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
CACNA1C-227ENST00000491104 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 NOP56O00567 594 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 MSCO60682 206 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 MMP3P08254 477 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 ACTR2P61160 394 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 KRT85P78386 507 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 SPIRE1Q08AE8 756 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 LRRC41Q15345 812 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 FSCN1Q16658 493 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 MIER3Q7Z3K6 550 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 LINC00301Q8NCQ3 95 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 RIT2Q99578 217 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 TBC1D22BQ9NU19 505 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 CEP131Q9UPN4 1083 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 Q9Y3F1 56 aa12.14□□□□□ -0.47
CACNA1C-227ENST00000491104 ELP1O95163 1332 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 MYH9P35579 1960 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 PP2D1A8MPX8 630 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 SPTLC2O15270 562 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 SGPL1O95470 568 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 YEATS4O95619 227 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 BMP15O95972 392 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 GJB1P08034 283 aa12.13□□□□□ -0.47
CACNA1C-227ENST00000491104 MYL3P08590 195 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms