RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SSR1P43307 286 aaKnown RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 XKR9Q5GH70 373 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 TOGARAM2Q6ZUX3 1019 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 UBR2Q8IWV8 1755 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 NPM3O75607 178 aaKnown RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 GABPB1Q06547 395 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 CCDC26Q8TAB7 109 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 CEP72Q9P209 647 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 E9PMD0 336 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 SHMT1P34896 483 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 DMP1Q13316 513 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 E4F1Q66K89 784 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 APOBEC3FQ8IUX4 373 aaKnown RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 FAM186BQ8IYM0 893 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 ADGRG1Q9Y653 693 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 PAPPAQ13219 1627 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 MEIS1O00470 390 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 EYA4O95677 639 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 CYP2J2P51589 502 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 SNAP25P60880 206 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 RPS6KA1Q15418 735 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 PTPN21Q16825 1174 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 FAM102BQ5T8I3 360 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 IFT20Q8IY31 132 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 FAM81BQ96LP2 452 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 BHMT2Q9H2M3 363 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 AZI2Q9H6S1 392 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 KCND2Q9NZV8 630 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 RNF14Q9UBS8 474 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 COL22A1Q8NFW1 1626 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 CRYBG1Q9Y4K1 1723 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 STRCQ7RTU9 1775 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 USP27XA6NNY8 438 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 WDR46O15213 610 aaKnown RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 ANKRD40Q6AI12 368 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 C8orf74Q6P047 294 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 SMAP1Q8IYB5 467 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 ACRBPQ8NEB7 543 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 DCPSQ96C86 337 aaKnown RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 DAAM1Q9Y4D1 1078 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 POTEB3A0JP26 581 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 SHTN1A0MZ66 631 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 POTECB2RU33 542 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 ZNF18P17022 549 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 KNOP1Q1ED39 458 aaKnown RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 POTEBQ6S5H4 581 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 APBB1IPQ7Z5R6 666 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 TC2NQ8N9U0 490 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 TCHPQ9BT92 498 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 KCND1Q9NSA2 647 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 TYW1Q9NV66 732 aaKnown RBP8.06□□□□□ -1.12
NPHP3-208ENST00000490993 PRR12Q9ULL5 1215 aa8.06□□□□□ -1.12
NPHP3-208ENST00000490993 LMNB1P20700 586 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EPHA7Q15375 998 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EARS2Q5JPH6 523 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 CDKAL1Q5VV42 579 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MAEAQ7L5Y9 396 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SAMD3Q8N6K7 520 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 UBL4BQ8N7F7 174 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 RNF216Q9NWF9 866 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 A0A1W2PQJ5 194 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 ANKRD62A6NC57 917 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PSMD14O00487 310 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SFNP31947 248 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 SP4Q02446 784 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 CENPHQ9H3R5 247 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MTUS1Q9ULD2 1270 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 JRKLQ9Y4A0 524 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PLCH1Q4KWH8 1693 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 FCER1AP12319 257 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MUTP22033 750 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 UBXN2AP68543 259 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MYL7Q01449 175 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 CACNB1Q02641 598 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PPP2R5EQ16537 467 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 DACT2Q5SW24 774 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MIS18BP1Q6P0N0 1132 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 RNF207Q6ZRF8 634 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EXOC8Q8IYI6 725 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 GJA10Q969M2 543 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MKL1Q969V6 931 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EIF2AK1Q9BQI3 630 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 TIPINQ9BVW5 301 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 ANO9A1A5B4 782 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 MYMKA6NI61 221 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 EIF3CLB5ME19 914 aaKnown RBP8.05□□□□□ -1.12
NPHP3-208ENST00000490993 PDXKO00764 312 aa8.05□□□□□ -1.12
NPHP3-208ENST00000490993 ERCC3P19447 782 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms