RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 CIITAP33076 1130 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 KCNB1Q14721 858 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
HDAC3-210ENST00000490808 E2F4Q16254 413 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 IL17AQ16552 155 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 ENOX1Q8TC92 643 aaKnown RBP11.5□□□□□ -0.57
HDAC3-210ENST00000490808 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 MRFAP1L1Q96HT8 127 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 MBOAT7Q96N66 472 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-210ENST00000490808 SRRDQ9UH36 339 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-210ENST00000490808 PLXNB2O15031 1838 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 TDP2O95551 362 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 RPN1P04843 607 aaKnown RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 ZNF75DP51815 510 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 TPD52L1Q16890 204 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 OTOP1Q7RTM1 612 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 ERCC4Q92889 916 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-210ENST00000490808 TRIM17Q9Y577 477 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 PLXNA1Q9UIW2 1896 aa11.49□□□□□ -0.57
HDAC3-210ENST00000490808 A0A087X0B3 334 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 ESPNB1AK53 854 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 CNMDO75829 334 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 HOXC6P09630 235 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 FCER1AP12319 257 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
HDAC3-210ENST00000490808 SNAP25P60880 206 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-210ENST00000490808 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 FCHSD1Q86WN1 690 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
HDAC3-210ENST00000490808 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 CTAGE1Q96RT6 745 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
HDAC3-210ENST00000490808 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
HDAC3-210ENST00000490808 PFASO15067 1338 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
HDAC3-210ENST00000490808 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 SLC37A4O43826 429 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 KIF20AO95235 890 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 SERPINC1P01008 464 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PLCG1P19174 1290 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 ERCC3P19447 782 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 MUTP22033 750 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
HDAC3-210ENST00000490808 RGS2P41220 211 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 HSD17B4P51659 736 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 GHRHRQ02643 423 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 SPAG1Q07617 926 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PSMD2Q13200 908 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 GRB14Q14449 540 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PLS1Q14651 629 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 KCTD2Q14681 263 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PRR16Q569H4 304 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 HYIQ5T013 277 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
HDAC3-210ENST00000490808 XRRA1Q6P2D8 792 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 CNNM4Q6P4Q7 775 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 LARP4BQ92615 738 aaKnown RBP11.47□□□□□ -0.57
HDAC3-210ENST00000490808 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 EXOC1Q9NV70 894 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 IMPACTQ9P2X3 320 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 TCEAL9Q9UHQ7 104 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
HDAC3-210ENST00000490808 BICDL2A1A5D9 508 aa11.46□□□□□ -0.57
HDAC3-210ENST00000490808 B4DLN1 442 aa11.46□□□□□ -0.57
HDAC3-210ENST00000490808 DLL1O00548 723 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms