RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
USP39-216ENST00000490193 PCDHB15Q9Y5E8 787 aa9.58□□□□□ -0.88
USP39-216ENST00000490193 C5orf42Q9H799 3197 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 H3BNC9 293 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 CAND2O75155 1236 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 NR3C2P08235 984 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ZNF286BP0CG31 522 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 HSD17B4P51659 736 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 HIC1Q14526 733 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 QRICH1Q2TAL8 776 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 EPC2Q52LR7 807 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ASPRV1Q53RT3 343 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ARSIQ5FYB1 569 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ARHGEF16Q5VV41 709 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 FAM117BQ6P1L5 589 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 KCNV1Q6PIU1 500 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ZNF589Q86UQ0 364 aaPredicted RBP9.57□□□□□ -0.88
USP39-216ENST00000490193 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 DHX37Q8IY37 1157 aaKnown RBP9.57□□□□□ -0.88
USP39-216ENST00000490193 ADGRF4Q8IZF3 695 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 PNMA1Q8ND90 353 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 DBF4BQ8NFT6 615 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 ESR2Q92731 530 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 PABPC5Q96DU9 382 aaKnown RBP9.57□□□□□ -0.88
USP39-216ENST00000490193 ALG1Q9BT22 464 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 CPVLQ9H3G5 476 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 MAP3K20Q9NYL2 800 aaKnown RBP9.57□□□□□ -0.88
USP39-216ENST00000490193 MRPL11Q9Y3B7 192 aaKnown RBP9.57□□□□□ -0.88
USP39-216ENST00000490193 MRVI1Q9Y6F6 885 aa9.57□□□□□ -0.88
USP39-216ENST00000490193 CCDC171Q6TFL3 1326 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 RSPH10B2B2RC85 870 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 OPLAHO14841 1288 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 DCXO43602 365 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 RGS20O76081 388 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 RSPH10BP0C881 870 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 EIF2AK2P19525 551 aaKnown RBP9.56□□□□□ -0.88
USP39-216ENST00000490193 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
USP39-216ENST00000490193 PDE1AP54750 535 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 HAND2P61296 217 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
USP39-216ENST00000490193 ZNF200P98182 395 aaPredicted RBP9.56□□□□□ -0.88
USP39-216ENST00000490193 ZP2Q05996 745 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 HSDL1Q3SXM5 330 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 CELF3Q5SZQ8 465 aaKnown RBP9.56□□□□□ -0.88
USP39-216ENST00000490193 FBXO11Q86XK2 927 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 MYOCDQ8IZQ8 938 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 SAMD3Q8N6K7 520 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 TOP1MTQ969P6 601 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 PDCD2LQ9BRP1 358 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 C16orf70Q9BSU1 422 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 FAM50BQ9Y247 325 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 NEDD4P46934 1319 aa9.56□□□□□ -0.88
USP39-216ENST00000490193 C5orf67F2Z3F1 127 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 H3BQ06 376 aaPredicted RBP9.55□□□□□ -0.88
USP39-216ENST00000490193 NCK2O43639 380 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 TGFB3P10600 412 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 THPOP40225 353 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 NHLH1Q02575 133 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
USP39-216ENST00000490193 GPM6BQ13491 265 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 CSPP1Q1MSJ5 1256 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 CTC1Q2NKJ3 1217 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 TCEAL5Q5H9L2 206 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 STOX1Q6ZVD7 989 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 IQCA1Q86XH1 822 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 ADHFE1Q8IWW8 467 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 TMEM192Q8IY95 271 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 SEPT8Q92599 483 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 NSUN3Q9H649 340 aaKnown RBP9.55□□□□□ -0.88
USP39-216ENST00000490193 KAT14Q9H8E8 782 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 JMJD4Q9H9V9 463 aa9.55□□□□□ -0.88
USP39-216ENST00000490193 DOCK5Q9H7D0 1870 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
USP39-216ENST00000490193 C17orf102A2RUQ5 167 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 GGPS1O95749 300 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 CFBP00751 764 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 UBA1P22314 1058 aaKnown RBP9.54□□□□□ -0.88
USP39-216ENST00000490193 MFAP1P55081 439 aaKnown RBP9.54□□□□□ -0.88
USP39-216ENST00000490193 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 ENAHQ8N8S7 591 aaPredicted RBP9.54□□□□□ -0.88
USP39-216ENST00000490193 APBB2Q92870 758 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 ATP6V0A1Q93050 837 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 MTMR8Q96EF0 704 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 SPATA33Q96N06 139 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 YME1L1Q96TA2 773 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 AMNQ9BXJ7 453 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
USP39-216ENST00000490193 LMAN2LQ9H0V9 348 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 MYO7AQ13402 2215 aa9.54□□□□□ -0.88
USP39-216ENST00000490193 H3BRB1 525 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 ZNF213O14771 459 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 KDM4AO75164 1064 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 RB1P06400 928 aa9.53□□□□□ -0.88
USP39-216ENST00000490193 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms