RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FRMD7Q6ZUT3 714 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 CATIPQ7Z7H3 387 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 RSC1A1Q92681 617 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 USP7Q93009 1102 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 TMEFF2Q9UIK5 374 aaPredicted RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 NOB1Q9ULX3 412 aaKnown RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 ABCC8Q09428 1581 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 KLHL33A6NCF5 533 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 EOMESO95936 686 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 LSP1P33241 339 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 CTSKP43235 329 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 SCNN1BP51168 640 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 PTK2BQ14289 1009 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 FAM50AQ14320 339 aaKnown RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 MAP1SQ66K74 1059 aaPredicted RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 UBE3DQ7Z6J8 389 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 DDX53Q86TM3 631 aaKnown RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 SH3RF2Q8TEC5 729 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 LEO1Q8WVC0 666 aaPredicted RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 SKA1Q96BD8 255 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 FOXQ1Q9C009 403 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 PRDM13Q9H4Q3 707 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 KIAA1586Q9HCI6 787 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 DCP1AQ9NPI6 582 aaPredicted RBP3.67□□□□□ -1.82
UBXN4-208ENST00000490163 CUL7Q14999 1698 aa3.67□□□□□ -1.82
UBXN4-208ENST00000490163 PPM1BO75688 479 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TSHRP16473 764 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 FUT4P22083 530 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 VAMP2P63027 116 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PFKPQ01813 784 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 STRN3Q13033 797 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PUM3Q15397 648 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 GAB4Q2WGN9 574 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 SV2CQ496J9 727 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 JAKMIP3Q5VZ66 844 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 WDR75Q8IWA0 830 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 NPAS3Q8IXF0 933 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TMEM130Q8N3G9 435 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 GOLGA6L1Q8N7Z2 621 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 GALNT11Q8NCW6 608 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 LRRN4CLQ8ND94 238 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 C1orf131Q8NDD1 294 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 BAHD1Q8TBE0 780 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 DCAF11Q8TEB1 546 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 BTN2A2Q8WVV5 523 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 AHCYL2Q96HN2 611 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 FANCD2OSQ96PS1 177 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 MPHOSPH6Q99547 160 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PITHD1Q9GZP4 211 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TBC1D22BQ9NU19 505 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 CCM2LQ9NUG4 571 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TMEM160Q9NX00 188 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 ARHGAP28Q9P2N2 729 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 AKT3Q9Y243 479 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 RPGRIP1LQ68CZ1 1315 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TDRD9Q8NDG6 1382 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 MRC2Q9UBG0 1479 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 A0A087WV62 115 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 OFD1O75665 1012 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PLCG1P19174 1290 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 POLR2BP30876 1174 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PDCD1Q15116 288 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 KIAA1614Q5VZ46 1190 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 ESRP1Q6NXG1 681 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 FBXO11Q86XK2 927 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 RIOX2Q8IUF8 465 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 SPATA5Q8NB90 893 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TRERF1Q96PN7 1200 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 RXFP3Q9NSD7 469 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TRIM33Q9UPN9 1127 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 SF3B6Q9Y3B4 125 aaKnown RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 NUMBLQ9Y6R0 609 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 ISM1B1AKI9 464 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 M0R3H8 397 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 FSCN2O14926 492 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 GFRA3O60609 400 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 JMJD7P0C870 316 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TYRP14679 529 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 IL11P20809 199 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 ROR1Q01973 937 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TCIRG1Q13488 830 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 POLD3Q15054 466 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 PRICKLE4Q2TBC4 344 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 SYT9Q86SS6 491 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 TBC1D1Q86TI0 1168 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-208ENST00000490163 LZTR1Q8N653 840 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 CREB3L4Q8TEY5 395 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 RFFLQ8WZ73 363 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 C22orf23Q9BZE7 217 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 EPS15L1Q9UBC2 864 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 MYO1AQ9UBC5 1043 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 IP6K2Q9UHH9 426 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 DAAM1Q9Y4D1 1078 aa3.66□□□□□ -1.82
UBXN4-208ENST00000490163 KIF21BO75037 1637 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 TOPBP1Q92547 1522 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 LMTK3Q96Q04 1460 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 COL15A1P39059 1388 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 RASSF10A6NK89 507 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 ADAMTS3O15072 1205 aa3.65□□□□□ -1.82
UBXN4-208ENST00000490163 TADA3O75528 432 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms