RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 E9PSI1 815 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 F13BP05160 661 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 GNA15P30679 374 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 FGD1P98174 961 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 SP3Q02447 781 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 VGLL4Q14135 290 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 ATG9AQ7Z3C6 839 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 FAM83AQ86UY5 434 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 ARMC5Q96C12 935 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 ERO1AQ96HE7 468 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 CRIM1Q9NZV1 1036 aa7.95□□□□□ -1.14
PRPF40A-210ENST00000489741 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 EYA2O00167 538 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 ENC1O14682 589 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 EIF4BP23588 611 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 TNNI2P48788 182 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 GTF2A2P52657 109 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 CHAF1AQ13111 956 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 COL19A1Q14993 1142 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 ALDH1L2Q3SY69 923 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 ZAR1Q86SH2 424 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 VPS37DQ86XT2 251 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 FAM43AQ8N2R8 423 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 CD99L2Q8TCZ2 262 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 LPIN2Q92539 896 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 TEKT1Q969V4 418 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 GSX1Q9H4S2 264 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 ZNF112Q9UJU3 913 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 SNCAIPQ9Y6H5 919 aa7.94□□□□□ -1.14
PRPF40A-210ENST00000489741 PAGE1O75459 146 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 CIAO1O76071 339 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 MED26O95402 600 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 IFIT1P09914 478 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 ADMP35318 185 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 CACNB3P54284 484 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 CPSF6Q16630 551 aaKnown RBP eCLIP7.93□□□□□ -1.141e-15■■■■□ 19.8
PRPF40A-210ENST00000489741 ERO1BQ86YB8 467 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 WDR66Q8TBY9 1149 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 DUSP9Q99956 384 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 ZCCHC17Q9NP64 241 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 KIAA0100Q14667 2235 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-210ENST00000489741 CCL15-CCL14A0A0B4J2E2 113 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 KIAA1324LA8MWY0 1029 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 BTBD19C9JJ37 291 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 TLR2O60603 784 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 RNGTTO60942 597 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 CETPP11597 493 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 PPIL2Q13356 520 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 CCL15Q16663 113 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 CDC42EP5Q6NZY7 148 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 SHISA5Q8N114 240 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 GPBAR1Q8TDU6 330 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 FAM151AQ8WW52 585 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 ZKSCAN4Q969J2 545 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 ZNF333Q96JL9 665 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 PCDHGC5Q9Y5F6 944 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 CSADQ9Y600 493 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 MAST3O60307 1309 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 RPAP1Q9BWH6 1393 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 A0A1B0GUL6 1792 aa7.92□□□□□ -1.14
PRPF40A-210ENST00000489741 RANBP2P49792 3224 aaKnown RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 DYNC1LI2O43237 492 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 CELA3AP09093 270 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 CT47B1P0C2W7 299 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 SLC5A1P13866 664 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 EN2P19622 333 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 PPATQ06203 517 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 MOGSQ13724 837 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 TAF1CQ15572 869 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 LLGL2Q6P1M3 1020 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 C17orf99Q6UX52 265 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 SMYD4Q8IYR2 804 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 GRIN3AQ8TCU5 1115 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 HOOK2Q96ED9 719 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 WRNIP1Q96S55 665 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 DISC1Q9NRI5 854 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 SALL1Q9NSC2 1324 aa7.91□□□□□ -1.14
PRPF40A-210ENST00000489741 LAMB1P07942 1786 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 PRDX5P30044 214 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 LACTBP83111 547 aaPredicted RBP7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 CYP27A1Q02318 531 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 SNAPC2Q13487 334 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 TTLL4Q14679 1199 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 LRRC14Q15048 493 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 ARHGEF6Q15052 776 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 NOL9Q5SY16 702 aaKnown RBP7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 DCAF15Q66K64 600 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 MIGA2Q7L4E1 593 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 ZFPM1Q8IX07 1006 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 ZNF341Q9BYN7 854 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 ARHGAP39Q9C0H5 1083 aa7.9□□□□□ -1.14
PRPF40A-210ENST00000489741 GZF1Q9H116 711 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms