RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 ZBTB5O15062 677 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 GRIN3BO60391 1043 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 STX1AQ16623 288 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 SCYL3Q8IZE3 742 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 LMBR1Q8WVP7 490 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 CCDC97Q96F63 343 aaPredicted RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
NOD1-208ENST00000489614 FBXO2Q9UK22 296 aaPredicted RBP10.88□□□□□ -0.67
NOD1-208ENST00000489614 KIAA1217Q5T5P2 1943 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 FOSBP53539 338 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 RILPL1Q5EBL4 403 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.67
NOD1-208ENST00000489614 RRP36Q96EU6 259 aaKnown RBP10.87□□□□□ -0.67
NOD1-208ENST00000489614 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 RIC8AQ9NPQ8 531 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 PCDHA7Q9UN72 937 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 ADAMTS5Q9UNA0 930 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 SCAF8Q9UPN6 1271 aaKnown RBP10.87□□□□□ -0.67
NOD1-208ENST00000489614 CALML3P27482 149 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 WLSQ5T9L3 541 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 CCDC82Q8N4S0 544 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 HOOK2Q96ED9 719 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 UBA5Q9GZZ9 404 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 ARHGEF10LQ9HCE6 1279 aa10.87□□□□□ -0.67
NOD1-208ENST00000489614 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 SYF2O95926 243 aaKnown RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 RAB27AP51159 221 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 KCTD1Q719H9 257 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 CCDC148Q8NFR7 591 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 MBOAT7Q96N66 472 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 CABP5Q9NP86 173 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ZNF536O15090 1300 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 FRMPD4Q14CM0 1322 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 SOCS7O14512 581 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 NDUFAB1O14561 156 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 CCP110O43303 1012 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 BMP3P12645 472 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 PTPRAP18433 802 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 TRIM29Q14134 588 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ANKRD23Q86SG2 305 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ELOA2Q8IYF1 753 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 REPS2Q8NFH8 660 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 KCNG4Q8TDN1 519 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 SUDS3Q9H7L9 328 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 IMPACTQ9P2X3 320 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 PPP2R2CQ9Y2T4 447 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 PCDHB6Q9Y5E3 794 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 PLXNA1Q9UIW2 1896 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 PLXNB2O15031 1838 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ZNFX1Q9P2E3 1918 aaKnown RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 UPP2O95045 317 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 XBP1P17861 261 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ABCD1P33897 745 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 GNGT1P63211 74 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 CCDC40Q4G0X9 1142 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 RESP18Q5W5W9 173 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 DCAF15Q66K64 600 aa10.86□□□□□ -0.67
NOD1-208ENST00000489614 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
NOD1-208ENST00000489614 EIF4E1BA6NMX2 242 aaKnown RBP10.85□□□□□ -0.67
NOD1-208ENST00000489614 PTPREP23469 700 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
NOD1-208ENST00000489614 PPARDQ03181 441 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 IL17AQ16552 155 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 SYDE2Q5VT97 1194 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 CEP57L1Q8IYX8 460 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 LPAR1Q92633 364 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 TBC1D31Q96DN5 1066 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 DESI2Q9BSY9 194 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
NOD1-208ENST00000489614 PRR12Q9ULL5 1215 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 BIN1O00499 593 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 CAVIN2O95810 425 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 PYGBP11216 843 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 MOGSQ13724 837 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 SHC4Q6S5L8 630 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 DRAXINQ8NBI3 349 aaPredicted RBP10.85□□□□□ -0.67
NOD1-208ENST00000489614 FAM76AQ8TAV0 307 aa10.85□□□□□ -0.67
NOD1-208ENST00000489614 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms