RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
SCAMP4-208ENST00000489554 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
SCAMP4-208ENST00000489554 V9GY48 417 aaPredicted RBP12.07□□□□□ -0.48
SCAMP4-208ENST00000489554 KIAA1217Q5T5P2 1943 aa12.07□□□□□ -0.48
SCAMP4-208ENST00000489554 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 F2P00734 622 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 PFKMP08237 780 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 CYP2C9P11712 490 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 CCL23P55773 120 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 CHMP4BP1P59074 171 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 BFSP2Q13515 415 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 NEDD9Q14511 834 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 NPY5RQ15761 445 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 HSDL1Q3SXM5 330 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 Q7L0L9 218 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 KAT2BQ92831 832 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 WNT8AQ9H1J5 351 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 EHMT1Q9H9B1 1298 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 MTMR10Q9NXD2 777 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 UMODL1Q5DID0 1318 aa12.06□□□□□ -0.48
SCAMP4-208ENST00000489554 TMEM265A0A087WTH1 108 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 HAS3O00219 553 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 ADAMTS3O15072 1205 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 DEXIO95424 95 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 FGBP02675 491 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 ACRP10323 421 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 SYT1P21579 422 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 RFC2P35250 354 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 PSEN2P49810 448 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 NAPAP54920 295 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 SP2Q02086 613 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 MFSD10Q14728 455 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 PTGISQ16647 500 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 RASIP1Q5U651 963 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 WWC2Q6AWC2 1192 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 CPLX2Q6PUV4 134 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 C7orf31Q8N865 590 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 HERVK_113Q902F9 699 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 GPRASP2Q96D09 838 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 CDHR1Q96JP9 859 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 GLT8D2Q9H1C3 349 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 GTF2IRD1Q9UHL9 959 aa12.05□□□□□ -0.48
SCAMP4-208ENST00000489554 STXBP3O00186 592 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 HSP90AA1P07900 732 aaKnown RBP12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 SCG2P13521 617 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 SEMA3FQ13275 785 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 UBE2SQ16763 222 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 PPP1R13LQ8WUF5 828 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 SCLYQ96I15 445 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 RIC8AQ9NPQ8 531 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 BARHL2Q9NY43 387 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 STXBP5LQ9Y2K9 1186 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
SCAMP4-208ENST00000489554 MAFGO15525 162 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 SORBS3O60504 671 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 FOSP01100 380 aaPredicted RBP12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 ADCY7P51828 1080 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 CYFIP1Q7L576 1253 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 AFAP1L1Q8TED9 768 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
SCAMP4-208ENST00000489554 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 H3BRB1 525 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 BRD1O95696 1058 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 LGALS2P05162 132 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 IQCF3P0C7M6 154 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 ACTN1P12814 892 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 DNAJB2P25686 324 aa12.02□□□□□ -0.49
SCAMP4-208ENST00000489554 FOSBP53539 338 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms