RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 IRX2Q9BZI1 471 aaPredicted RBP10.91□□□□□ -0.66
SSBP1-212ENST00000489378 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
SSBP1-212ENST00000489378 PAG1Q9NWQ8 432 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 PRR12Q9ULL5 1215 aa10.91□□□□□ -0.66
SSBP1-212ENST00000489378 KMT2BQ9UMN6 2715 aaPredicted RBP10.9□□□□□ -0.66
SSBP1-212ENST00000489378 MYH7P12883 1935 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 MED19A0JLT2 244 aaPredicted RBP10.9□□□□□ -0.66
SSBP1-212ENST00000489378 UPP2O95045 317 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 CSPG5O95196 566 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 PDGFBP01127 241 aaPredicted RBP10.9□□□□□ -0.66
SSBP1-212ENST00000489378 MMP3P08254 477 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 SLC1A4P43007 532 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 ZNF200P98182 395 aaPredicted RBP10.9□□□□□ -0.66
SSBP1-212ENST00000489378 KCNC4Q03721 635 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 CBX2Q14781 532 aaPredicted RBP10.9□□□□□ -0.66
SSBP1-212ENST00000489378 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 SCFD2Q8WU76 684 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 GMCL1Q96IK5 515 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 MSLNLQ96KJ4 702 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 ZNF292O60281 2723 aa10.9□□□□□ -0.66
SSBP1-212ENST00000489378 DNAH14Q0VDD8 3507 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 LOC102724159A0A0B4J2E5 919 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 GSG1L2A8MUP6 293 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 KDM4AO75164 1064 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 EYA4O95677 639 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 EDNRBP24530 442 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 CALML3P27482 149 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 CTNNB1P35222 781 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 NBL1P41271 181 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PDE4BQ07343 736 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PDE4DQ08499 809 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PTK7Q13308 1070 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 ADAM15Q13444 863 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PWP2Q15269 919 aaKnown RBP10.89□□□□□ -0.67
SSBP1-212ENST00000489378 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
SSBP1-212ENST00000489378 C7orf31Q8N865 590 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 TOP1MTQ969P6 601 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 ALG1Q9BT22 464 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.89□□□□□ -0.677e-14■□□□□ 9.4
SSBP1-212ENST00000489378 BOLA2Q9H3K6 86 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 INCENPQ9NQS7 918 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
SSBP1-212ENST00000489378 PLA2G6O60733 806 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 ICAM1P05362 532 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 NDUFV1P49821 464 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
SSBP1-212ENST00000489378 HIC1Q14526 733 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 CCDC62Q6P9F0 684 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 STRBPQ96SI9 672 aaKnown RBP10.88□□□□□ -0.67
SSBP1-212ENST00000489378 BCL11AQ9H165 835 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 ACACBO00763 2458 aa10.88□□□□□ -0.67
SSBP1-212ENST00000489378 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.87□□□□□ -0.67
SSBP1-212ENST00000489378 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 RCSD1Q6JBY9 416 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 CHST3Q7LGC8 479 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 FRMD5Q7Z6J6 570 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 ADSSL1Q8N142 457 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 SMRP1Q8NCR6 262 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 NEDD1Q8NHV4 660 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 RPGRIP1Q96KN7 1286 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 LMAN2LQ9H0V9 348 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
SSBP1-212ENST00000489378 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
SSBP1-212ENST00000489378 PLIN4Q96Q06 1357 aa10.87□□□□□ -0.67
SSBP1-212ENST00000489378 CEP250Q9BV73 2442 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 RSPH10B2B2RC85 870 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 RB1P06400 928 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 RSPH10BP0C881 870 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
SSBP1-212ENST00000489378 BMPR1AP36894 532 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 THPOP40225 353 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 CAMK1Q14012 370 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 LY6KQ17RY6 165 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 TATDN2Q93075 761 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 C11orf84Q9BUA3 381 aaPredicted RBP10.86□□□□□ -0.67
SSBP1-212ENST00000489378 IFIH1Q9BYX4 1025 aaKnown RBP10.86□□□□□ -0.67
SSBP1-212ENST00000489378 RANBP17Q9H2T7 1088 aaKnown RBP10.86□□□□□ -0.67
SSBP1-212ENST00000489378 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
SSBP1-212ENST00000489378 HAS3O00219 553 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 GH1P01241 217 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 IFIT2P09913 472 aaKnown RBP10.85□□□□□ -0.67
SSBP1-212ENST00000489378 ZNF286BP0CG31 522 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms