RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.45□□□□□ -1.06
BEST3-205ENST00000488961 REXO2Q9Y3B8 237 aaKnown RBP8.45□□□□□ -1.06
BEST3-205ENST00000488961 TAF1LQ8IZX4 1826 aa8.45□□□□□ -1.06
BEST3-205ENST00000488961 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 DDX39AO00148 427 aaKnown RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 NCK2O43639 380 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 COQ9O75208 318 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 FAM163BP0C2L3 166 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 RPS6KA3P51812 740 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 NAP1L1P55209 391 aaKnown RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 GRB10Q13322 594 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 TBC1D25Q3MII6 688 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 BEND6Q5SZJ8 279 aaPredicted RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 PNKPQ96T60 521 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 NOC4LQ9BVI4 516 aaKnown RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 TRIM9Q9C026 710 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 LAMB1P07942 1786 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 CCDC151A5D8V7 595 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 CHUKO15111 745 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 STX10O60499 249 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 PYGLP06737 847 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 ATP2B4P23634 1241 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 ADCY7P51828 1080 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 RWDD2BP57060 319 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 PRR16Q569H4 304 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 HSP90B2PQ58FF3 399 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 HDXQ7Z353 690 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 ADSSL1Q8N142 457 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 CENPHQ9H3R5 247 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 MLXIPQ9HAP2 919 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 NID2Q14112 1375 aa8.44□□□□□ -1.06
BEST3-205ENST00000488961 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
BEST3-205ENST00000488961 RASSF10A6NK89 507 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 BUB1O43683 1085 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 EIF3JO75822 258 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 POLD1P28340 1107 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 LONP1P36776 959 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 SLC1A4P43007 532 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 APOBEC3HQ6NTF7 200 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 WDR59Q6PJI9 974 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 CEP57Q86XR8 500 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 CCDC148Q8NFR7 591 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 ABCB6Q9NP58 842 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 PACSIN2Q9UNF0 486 aaPredicted RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 PCDHA1Q9Y5I3 950 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 RSPH10B2B2RC85 870 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 EBAG9O00559 213 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 SNUPNO95149 360 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 ATP1A1P05023 1023 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 RSPH10BP0C881 870 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 CRKP46108 304 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 KCNA1Q09470 495 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 TRAF1Q13077 416 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 PABPC4Q13310 644 aaKnown RBP eCLIP8.43□□□□□ -1.06
BEST3-205ENST00000488961 MTA1Q13330 715 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 QRICH1Q2TAL8 776 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 KLHL23Q8NBE8 558 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 PIGOQ8TEQ8 1089 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 RABGGTAQ92696 567 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 DDX12PQ92771 950 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 ZMYND12Q9H0C1 365 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 HOMER2Q9NSB8 354 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 BLOC1S4Q9NUP1 217 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 MAGEC2Q9UBF1 373 aaPredicted RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 RWDD2AQ9UIY3 292 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 SCN9AQ15858 1988 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 MYH4Q9Y623 1939 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 KIF5CO60282 957 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 GH2P01242 217 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 SRGNP10124 158 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 IL1R1P14778 569 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 CCDC122Q5T0U0 273 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 KIAA1328Q86T90 577 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 C2CD5Q86YS7 1000 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 MB21D1Q8N884 522 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 FAM71BQ8TC56 605 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 AFAP1L1Q8TED9 768 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 GOLGA1Q92805 767 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 GLIS2Q9BZE0 524 aaPredicted RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 PSTPIP2Q9H939 334 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 DDX25Q9UHL0 483 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
BEST3-205ENST00000488961 LUC7L2Q9Y383 392 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 MKI67P46013 3256 aaKnown RBP8.43□□□□□ -1.06
BEST3-205ENST00000488961 PSMA7O14818 248 aa8.42□□□□□ -1.06
BEST3-205ENST00000488961 MYO1BO43795 1136 aa8.42□□□□□ -1.06
BEST3-205ENST00000488961 RNF40O75150 1001 aa8.42□□□□□ -1.06
BEST3-205ENST00000488961 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
BEST3-205ENST00000488961 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
BEST3-205ENST00000488961 PBX1P40424 430 aa8.42□□□□□ -1.06
BEST3-205ENST00000488961 CASP5P51878 434 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms