RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PCNX4Q63HM2 1172 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 ZNF577Q9BSK1 485 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 TEX13BQ9BXU2 312 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 WDR11Q9BZH6 1224 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 EXOC1Q9NV70 894 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 MYPNQ86TC9 1320 aa22.59■■□□□ 1.21
NECAB3-213ENST00000488489 SPDYE5A6NIY4 337 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 SETQ01105 290 aaPredicted RBP22.58■■□□□ 1.21
NECAB3-213ENST00000488489 CYP4A11Q02928 519 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 PPP2R5CQ13362 524 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 PGM5Q15124 567 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 CNNM4Q6P4Q7 775 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 ERMNQ8TAM6 284 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 DNAJC19Q96DA6 116 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 RMDN3Q96TC7 470 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 EIF2AK1Q9BQI3 630 aaKnown RBP22.58■■□□□ 1.21
NECAB3-213ENST00000488489 KCNH7Q9NS40 1196 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 INTS13Q9NVM9 706 aa22.58■■□□□ 1.21
NECAB3-213ENST00000488489 A0A0G2JLL6 359 aaPredicted RBP22.58■■□□□ 1.2
NECAB3-213ENST00000488489 PLA2G4BP0C869 781 aa22.58■■□□□ 1.2
NECAB3-213ENST00000488489 CDK11BP21127 795 aaKnown RBP22.58■■□□□ 1.2
NECAB3-213ENST00000488489 PMS1P54277 932 aaKnown RBP22.58■■□□□ 1.2
NECAB3-213ENST00000488489 CDKAL1Q5VV42 579 aa22.58■■□□□ 1.2
NECAB3-213ENST00000488489 UNC13DQ70J99 1090 aa22.58■■□□□ 1.2
NECAB3-213ENST00000488489 PRRT2Q7Z6L0 340 aaPredicted RBP22.58■■□□□ 1.2
NECAB3-213ENST00000488489 RGL1Q9NZL6 768 aa22.58■■□□□ 1.2
NECAB3-213ENST00000488489 PVALEFA0A1B0GWK0 134 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 IPO5O00410 1097 aaKnown RBP22.57■■□□□ 1.2
NECAB3-213ENST00000488489 CHMP2AO43633 222 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 GAS7O60861 476 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 SSBP05455 408 aaKnown RBP eCLIP22.57■■□□□ 1.2
NECAB3-213ENST00000488489 PLS1Q14651 629 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 FILIP1Q7Z7B0 1213 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 PNMA8AQ86V59 439 aaPredicted RBP22.57■■□□□ 1.2
NECAB3-213ENST00000488489 ZNF710Q8N1W2 664 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 KIAA0895Q8NCT3 520 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 HSD17B14Q9BPX1 270 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 PXMP2Q9NR77 195 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 UBIAD1Q9Y5Z9 338 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 TRIM49BA6NDI0 452 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 BCRP11274 1271 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 ARID5BQ14865 1188 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 TKFCQ3LXA3 575 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 B3GNT9Q6UX72 402 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 GADL1Q6ZQY3 521 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 PDCD2LQ9BRP1 358 aa22.57■■□□□ 1.2
NECAB3-213ENST00000488489 POLR3CQ9BUI4 534 aaPredicted RBP22.57■■□□□ 1.2
NECAB3-213ENST00000488489 SLC12A3P55017 1021 aa22.56■■□□□ 1.2
NECAB3-213ENST00000488489 PTPN21Q16825 1174 aa22.56■■□□□ 1.2
NECAB3-213ENST00000488489 APTXQ7Z2E3 356 aaKnown RBP22.56■■□□□ 1.2
NECAB3-213ENST00000488489 CCDC47Q96A33 483 aaKnown RBP22.56■■□□□ 1.2
NECAB3-213ENST00000488489 LRRC27Q9C0I9 530 aa22.56■■□□□ 1.2
NECAB3-213ENST00000488489 SLC39A2Q9NP94 309 aa22.56■■□□□ 1.2
NECAB3-213ENST00000488489 IDEP14735 1019 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 HOXA7P31268 230 aaPredicted RBP22.55■■□□□ 1.2
NECAB3-213ENST00000488489 EHHADHQ08426 723 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 LRMPQ12912 555 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 MAP1SQ66K74 1059 aaPredicted RBP22.55■■□□□ 1.2
NECAB3-213ENST00000488489 UNC45AQ9H3U1 944 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 PKD2L1Q9P0L9 805 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 LOC285556D6RIA3 1793 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 TRAF5O00463 557 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 CXCL11O14625 94 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 SLITRK3O94933 977 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 CYP11B2P19099 503 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 ARSHQ5FYA8 562 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 LBX2Q6XYB7 198 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 NIPA1Q7RTP0 329 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 PROCA1Q8NCQ7 364 aaPredicted RBP22.55■■□□□ 1.2
NECAB3-213ENST00000488489 A1CFQ9NQ94 594 aaKnown RBP22.55■■□□□ 1.2
NECAB3-213ENST00000488489 JADE2Q9NQC1 790 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 BTBD7Q9P203 1132 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 KCNH4Q9UQ05 1017 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 STK24Q9Y6E0 443 aa22.55■■□□□ 1.2
NECAB3-213ENST00000488489 NPHP3-ACAD11A0A0J9YXS1 232 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 DHX15O43143 795 aaKnown RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 MYCLP12524 364 aaPredicted RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.24e-8■■■■■ 35.4
NECAB3-213ENST00000488489 CTTNQ14247 550 aaKnown RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 ARHGEF16Q5VV41 709 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 TMC6Q7Z403 805 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 CACTINQ8WUQ7 758 aaKnown RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 RIT2Q99578 217 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 CCDC94Q9BW85 323 aaPredicted RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 ACAD9Q9H845 621 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 CYP39A1Q9NYL5 469 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 DNM3Q9UQ16 869 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 CBFA2T2O43439 604 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 ITGB3BPQ13352 177 aaPredicted RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 PPIL2Q13356 520 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 LDLRAD1Q5T700 205 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 GPBP1Q86WP2 473 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 TSC1Q92574 1164 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 DYDC2Q96IM9 177 aa22.54■■□□□ 1.2
NECAB3-213ENST00000488489 AGO4Q9HCK5 861 aaKnown RBP22.54■■□□□ 1.2
NECAB3-213ENST00000488489 PSMA7O14818 248 aa22.53■■□□□ 1.2
NECAB3-213ENST00000488489 CACNB1Q02641 598 aaPredicted RBP22.53■■□□□ 1.2
NECAB3-213ENST00000488489 STIM1Q13586 685 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms