RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 PCNX4Q63HM2 1172 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 NLRX1Q86UT6 975 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 CDHR1Q96JP9 859 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 RAD9AQ99638 391 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 SENP7Q9BQF6 1050 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 C16orf70Q9BSU1 422 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
VAMP7-206ENST00000488344 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 PRC1O43663 620 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 LGR5O75473 907 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 GJB5O95377 273 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 AMHP03971 560 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 LGALS2P05162 132 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 THPOP40225 353 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 ANTXR2P58335 489 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 SP2Q02086 613 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
VAMP7-206ENST00000488344 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
VAMP7-206ENST00000488344 UHRF1Q96T88 793 aaPredicted RBP12.94□□□□□ -0.34
VAMP7-206ENST00000488344 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
VAMP7-206ENST00000488344 SORBS3O60504 671 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 SMIM10L2AP0DMW4 78 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 SMIM10L2BP0DMW5 78 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 HOXC8P31273 242 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 LIFRP42702 1097 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
VAMP7-206ENST00000488344 GPNMBQ14956 572 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 SYNE3Q6ZMZ3 975 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 CYFIP1Q7L576 1253 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 GPRASP2Q96D09 838 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
VAMP7-206ENST00000488344 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
VAMP7-206ENST00000488344 DEFB103AP81534 67 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 SEPT8Q92599 483 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 APBB2Q92870 758 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 TTC28Q96AY4 2481 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 GPR20Q99678 358 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 INSL6Q9Y581 213 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 SLC12A7Q9Y666 1083 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
VAMP7-206ENST00000488344 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 PRUNE2Q8WUY3 3088 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 SPDYE3A6NKU9 549 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 RFXAPO00287 272 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 SLC27A2O14975 620 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 MAFGO15525 162 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 RPLP2P05387 115 aaKnown RBP12.91□□□□□ -0.34
VAMP7-206ENST00000488344 ERVK-21P61565 698 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 ZNF200P98182 395 aaPredicted RBP12.91□□□□□ -0.34
VAMP7-206ENST00000488344 GRB10Q13322 594 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
VAMP7-206ENST00000488344 TNPO1Q92973 898 aaKnown RBP12.91□□□□□ -0.34
VAMP7-206ENST00000488344 HLA-CQ95604 372 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
VAMP7-206ENST00000488344 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 MEIS2O14770 477 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
VAMP7-206ENST00000488344 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 WNT8BQ93098 351 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
VAMP7-206ENST00000488344 LSG1Q9H089 658 aaKnown RBP12.9□□□□□ -0.34
VAMP7-206ENST00000488344 RNPEPQ9H4A4 650 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
VAMP7-206ENST00000488344 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 LINC01553A4QN01 128 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 TREHO43280 583 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 SP4Q02446 784 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
VAMP7-206ENST00000488344 MTMR1Q13613 665 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms