RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 ZFP69BQ9UJL9 534 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
GABRE-209ENST00000486255 LZTS1Q9Y250 596 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
GABRE-209ENST00000486255 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
GABRE-209ENST00000486255 USH1GQ495M9 461 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 CYP4F22Q6NT55 531 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 DACH2Q96NX9 599 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 SH3GL2Q99962 352 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 NRBP1Q9UHY1 535 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 APOA1P02647 267 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 ACTN1P12814 892 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 CCDC15Q0P6D6 951 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 FOXD4Q12950 439 aaPredicted RBP9.47□□□□□ -0.89
GABRE-209ENST00000486255 C1orf146Q5VVC0 180 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 CRLF3Q8IUI8 442 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 FLCNQ8NFG4 579 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 ABCB6Q9NP58 842 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 KIF17Q9P2E2 1029 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 TLK1Q9UKI8 766 aa9.47□□□□□ -0.89
GABRE-209ENST00000486255 PGRMC1O00264 195 aaKnown RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 IRS4O14654 1257 aaPredicted RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 IL2RBP14784 551 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 ACTN3Q08043 901 aaPredicted RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 THOC5Q13769 683 aaKnown RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 TSPYL6Q8N831 410 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.89
GABRE-209ENST00000486255 GSDMAQ96QA5 445 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 IQANK1A0A1B0GTG1 560 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 RIMBP2O15034 1052 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 PDE6AP16499 860 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 PPP2R5BQ15173 497 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 TEDDM1Q5T9Z0 273 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 SPOPLQ6IQ16 392 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 FAM227BQ96M60 508 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 JAG2Q9Y219 1238 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 PLAAQ9Y263 795 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 ATP11BQ9Y2G3 1177 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 EIF4E1BA6NMX2 242 aaKnown RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 K7ENM7 598 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 GTPBP6O43824 516 aaPredicted RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 CEP55Q53EZ4 464 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 TNNI3KQ59H18 835 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 MYLK4Q86YV6 388 aaPredicted RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 NCLNQ969V3 563 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 DIABLOQ9NR28 239 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 CCDC87Q9NVE4 849 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 STX18Q9P2W9 335 aaKnown RBP9.46□□□□□ -0.89
GABRE-209ENST00000486255 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.89
GABRE-209ENST00000486255 ITSN1Q15811 1721 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 IFRD2Q12894 506 aaPredicted RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 TERF2Q15554 542 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 DEPTORQ8TB45 409 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 MRPL40Q9NQ50 206 aaKnown RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 ATG3Q9NT62 314 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 EXOC1LA0A1B0GW35 172 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 A0A1B0GW55 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 SLC7A5Q01650 507 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 PUM3Q15397 648 aaKnown RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 CACTINQ8WUQ7 758 aaKnown RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 CNOT6LQ96LI5 555 aaKnown RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 CCDC90BQ9GZT6 254 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 STOML1Q9UBI4 398 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 DUX4Q9UBX2 424 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 ARMCX3Q9UH62 379 aaPredicted RBP9.46□□□□□ -0.9
GABRE-209ENST00000486255 SLC13A4Q9UKG4 626 aa9.46□□□□□ -0.9
GABRE-209ENST00000486255 SCG2P13521 617 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 TECP42680 631 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 LIG4P49917 911 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 PGBD1Q96JS3 809 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 MMS19Q96T76 1030 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 KCNG1Q9UIX4 513 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 L3MBTL1Q9Y468 752 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 MMEP08473 750 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 MAPK4P31152 587 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 MFAP3P55082 362 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 FSCBQ5H9T9 825 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 BEND6Q5SZJ8 279 aaPredicted RBP9.45□□□□□ -0.9
GABRE-209ENST00000486255 MID2Q9UJV3 735 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 TRAF3IP3Q9Y228 551 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 E2F6O75461 281 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 SLC4A1P02730 911 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 KRT1P04264 644 aa9.45□□□□□ -0.9
GABRE-209ENST00000486255 POLR2BP30876 1174 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms