RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 MAPK8IP1Q9UQF2 711 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 PCDHA2Q9Y5H9 948 aa13.31□□□□□ -0.28
PKP4-213ENST00000486254 EYA4O95677 639 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 GNA14O95837 355 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 MARSP56192 900 aaKnown RBP13.3□□□□□ -0.28
PKP4-213ENST00000486254 BACE1P56817 501 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 RBL2Q08999 1139 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 SYCP1Q15431 976 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 LRRC55Q6ZSA7 311 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 OTOP1Q7RTM1 612 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 GPBP1Q86WP2 473 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 CNOT6LQ96LI5 555 aaKnown RBP13.3□□□□□ -0.28
PKP4-213ENST00000486254 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
PKP4-213ENST00000486254 PHLPP2Q6ZVD8 1323 aa13.3□□□□□ -0.28
PKP4-213ENST00000486254 A0A1W2PQJ5 194 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 CTIFO43310 598 aaKnown RBP13.29□□□□□ -0.28
PKP4-213ENST00000486254 IDEP14735 1019 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
PKP4-213ENST00000486254 UBXN1Q04323 297 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 ZYXQ15942 572 aaKnown RBP13.29□□□□□ -0.28
PKP4-213ENST00000486254 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 LRCH2Q5VUJ6 765 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 PCNX4Q63HM2 1172 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 DYMQ7RTS9 669 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
PKP4-213ENST00000486254 MXRA8Q9BRK3 442 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 PICK1Q9NRD5 415 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 OLFML3Q9NRN5 406 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
PKP4-213ENST00000486254 ADAMTS5Q9UNA0 930 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 GJA3Q9Y6H8 435 aa13.29□□□□□ -0.28
PKP4-213ENST00000486254 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 E9PMD0 336 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 GAP43P17677 238 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 PTPRAP18433 802 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 STAT3P40763 770 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 ADKP55263 362 aaKnown RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 MTMR2Q13614 643 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 EPHA7Q15375 998 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 POTEEQ6S8J3 1075 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 REXO1L1PQ8IX06 675 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
PKP4-213ENST00000486254 TTYH3Q9C0H2 523 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 VPS16Q9H269 839 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 SEL1LQ9UBV2 794 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 CAPN11Q9UMQ6 739 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 PPP2R2CQ9Y2T4 447 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 SSC5DA1L4H1 1573 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 UBE4BO95155 1302 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 GAS7O60861 476 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 ZBED4O75132 1171 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 FLOT1O75955 427 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 CCDC175P0C221 793 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 CASP14P31944 242 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 CDK17Q00537 523 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 TKFCQ3LXA3 575 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 MIIPQ5JXC2 388 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 GJA10Q969M2 543 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 KLRG1Q96E93 195 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 RPAP3Q9H6T3 665 aaPredicted RBP13.28□□□□□ -0.28
PKP4-213ENST00000486254 L2HGDHQ9H9P8 463 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 UBIAD1Q9Y5Z9 338 aa13.28□□□□□ -0.28
PKP4-213ENST00000486254 VWA5AO00534 786 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 LYPLA2O95372 231 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
PKP4-213ENST00000486254 GIT2Q14161 759 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 MEA1Q16626 185 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 EPM2AIP1Q7L775 607 aaPredicted RBP13.27□□□□□ -0.29
PKP4-213ENST00000486254 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.29
PKP4-213ENST00000486254 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
PKP4-213ENST00000486254 TBC1D5Q92609 795 aa13.27□□□□□ -0.29
PKP4-213ENST00000486254 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms