RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 CCDC124Q96CT7 223 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 SPDL1Q96EA4 605 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 GSTA4O15217 222 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 KRT1P04264 644 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 STK38LQ9Y2H1 464 aa11.44□□□□□ -0.58
SRGAP3-207ENST00000485983 DTNBO60941 627 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 TSPY1Q01534 308 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 NUDT18Q6ZVK8 323 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 DHTKD1Q96HY7 919 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 FOXP1Q9H334 677 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 PHLPP2Q6ZVD8 1323 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 DHX38Q92620 1227 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 ALKBH8Q96BT7 664 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 MAGED2Q9UNF1 606 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 INSRP06213 1382 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 CHEK2O96017 543 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 ADORA1P30542 326 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 PHEXP78562 749 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 UHMK1Q8TAS1 419 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 TUBGCP2Q9BSJ2 902 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 MSTO1Q9BUK6 570 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 TTI1O43156 1089 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 LDHAP00338 332 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 CD58P19256 250 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 EEF1GP26641 437 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 KCNQ4P56696 695 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 STXBP2Q15833 593 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 TTC30BQ8N4P2 665 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 RASSF4Q9H2L5 321 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 HPCAL4Q9UM19 191 aa11.43□□□□□ -0.58
SRGAP3-207ENST00000485983 FBXW4P57775 412 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 RBM6P78332 1123 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 TWF2Q6IBS0 349 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 TMEM179Q6ZVK1 233 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 GSDMAQ96QA5 445 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 MID2Q9UJV3 735 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 MXI1P50539 228 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 EHHADHQ08426 723 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 ELF2Q15723 593 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 SPZ1Q9BXG8 430 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 KCNH4Q9UQ05 1017 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 LTKP29376 864 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 MUM1Q2TAK8 710 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 RWDD4Q6NW29 188 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 VPS39Q96JC1 886 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 EPS15L1Q9UBC2 864 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 PTPN22Q9Y2R2 807 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 CLIC2O15247 247 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 PDIA3P30101 505 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 COPB1P53618 953 aaKnown RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 PTH1RQ03431 593 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 PCGF5Q86SE9 256 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 CLIC6Q96NY7 704 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 BAIAP2L1Q9UHR4 511 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 EPN1Q9Y6I3 576 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 MEIS1O00470 390 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 HSPA6P17066 643 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 SERPINB6P35237 376 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 MSH2P43246 934 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 IL9RQ01113 521 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 KLC3Q6P597 504 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 SCN4BQ8IWT1 228 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 GDAP1L1Q96MZ0 367 aa11.42□□□□□ -0.58
SRGAP3-207ENST00000485983 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 GADD45BO75293 160 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 SEPT2Q15019 361 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 BRD3Q15059 726 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 TBCCQ15814 346 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 TTC23LQ6PF05 361 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 LRRC31Q6UY01 552 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 CCHCR1Q8TD31 782 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ZSWIM6Q9HCJ5 1215 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 JRKLQ9Y4A0 524 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 UBN2Q6ZU65 1347 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 ADCY9O60503 1353 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 IQCA1LA6NCM1 817 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 LRRN2O75325 713 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 HOXA7P31268 230 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 JAK3P52333 1124 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 DYNLT1P63172 113 aa11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 BASP1P80723 227 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-207ENST00000485983 RASSF7Q02833 373 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms