RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 NUCKS1Q9H1E3 243 aaKnown RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 TMX4Q9H1E5 349 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 INTS7Q9NVH2 962 aaKnown RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 C9orf78Q9NZ63 289 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 KLHL3Q9UH77 587 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 SOX13Q9UN79 622 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 SLX4Q8IY92 1834 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
NHLRC3-205ENST00000485407 COL11A2P13942 1736 aaPredicted RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 GPR25O00155 361 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 GFRA2O00451 464 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 SH3BP5O60239 455 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 BCAR3O75815 825 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 EYA4O95677 639 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 CSF1RP07333 972 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 PAX3P23760 479 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 NEK4P51957 841 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 GRAPQ13588 217 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 MTMR1Q13613 665 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 IKBKEQ14164 716 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 INPP5AQ14642 412 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 PCSK7Q16549 785 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 CCDC93Q567U6 631 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 LYPD4Q6UWN0 246 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 UBE3BQ7Z3V4 1068 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 NECAB2Q7Z6G3 386 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 SCUBE1Q8IWY4 988 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 TTLL11Q8NHH1 800 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 TTC8Q8TAM2 541 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 GRAPLQ8TC17 118 aaPredicted RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 GPBAR1Q8TDU6 330 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 DDX1Q92499 740 aaKnown RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 PLPPR2Q96GM1 343 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 AARSD1Q9BTE6 412 aaKnown RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 MRPL4Q9BYD3 311 aaKnown RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 UBE2OQ9C0C9 1292 aaKnown RBP6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 LACRTQ9GZZ8 138 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 VPS33BQ9H267 617 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 CNNM2Q9H8M5 875 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 FAM86C1Q9NVL1 165 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 SNCAIPQ9Y6H5 919 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 FER1L6Q2WGJ9 1857 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 ABCC4O15439 1325 aa6.74□□□□□ -1.33
NHLRC3-205ENST00000485407 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 TNFRSF10CO14798 259 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 BNIP3LO60238 219 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 NAT2P11245 290 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 TRIM27P14373 513 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 CTSWP56202 376 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 RPS8P62241 208 aaKnown RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 PDE4BQ07343 736 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 MAP7Q14244 749 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 HLTFQ14527 1009 aaKnown RBP eCLIP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 C4orf46Q504U0 113 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 FOXR1Q6PIV2 292 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 LRFN4Q6PJG9 635 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 PASD1Q8IV76 773 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 SAMD3Q8N6K7 520 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 ELMO3Q96BJ8 720 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 CDC5LQ99459 802 aaKnown RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 USP44Q9H0E7 712 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 CCDC8Q9H0W5 538 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 TAF1DQ9H5J8 278 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 RCAN3Q9UKA8 241 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 ZNF214Q9UL59 606 aaPredicted RBP6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 ATP6V0A2Q9Y487 856 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 CACNA1SQ13698 1873 aa6.73□□□□□ -1.33
NHLRC3-205ENST00000485407 DICER1Q9UPY3 1922 aaKnown RBP6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GOLGA6CA6NDK9 693 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GOLGA6BA6NDN3 693 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 PRODHO43272 600 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 DNAJA2O60884 412 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 THBS1P07996 1170 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GNAI3P08754 354 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GOLGA6DP0CG33 693 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 CPB1P15086 417 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 RAG1P15918 1043 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 FOXO4P98177 505 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GSTM4Q03013 218 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 GRM1Q13255 1194 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 PIN1Q13526 163 aaPredicted RBP6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 RABL6Q3YEC7 729 aaPredicted RBP6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 LHFPL2Q6ZUX7 228 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 ZBTB46Q86UZ6 589 aa6.72□□□□□ -1.33
NHLRC3-205ENST00000485407 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms