RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 PCDHA1Q9Y5I3 950 aa9.53□□□□□ -0.88
TMEM248-206ENST00000484751 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
TMEM248-206ENST00000484751 A0A0U1RQJ8 604 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 GRID2IPA4D2P6 1211 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 LRRC53A6NM62 1247 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 USP17L10C9JJH3 530 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 SLC16A3O15427 465 aaKnown RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 OPA1O60313 960 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 TBCAO75347 108 aaKnown RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 GAP43P17677 238 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 MUTP22033 750 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 CRKP46108 304 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 EIF6P56537 245 aaKnown RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 APBA1Q02410 837 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 DDR1Q08345 913 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 NNTQ13423 1086 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ASIC2Q16515 512 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 CDC37Q16543 378 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 UBE2SQ16763 222 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 CFAP221Q4G0U5 840 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 STRIP1Q5VSL9 837 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 FRMD5Q7Z6J6 570 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 FBXO11Q86XK2 927 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ZC3H3Q8IXZ2 948 aaKnown RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 NOA1Q8NC60 698 aaKnown RBP9.52□□□□□ -0.89
TMEM248-206ENST00000484751 LRRC15Q8TF66 581 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ATRIPQ8WXE1 791 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 DNAJC19Q96DA6 116 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 MASTLQ96GX5 879 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 GMCL1Q96IK5 515 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 IDI2Q9BXS1 227 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 KCNMB3Q9NPA1 279 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ST7Q9NRC1 585 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 VPS18Q9P253 973 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ARHGAP20Q9P2F6 1191 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 ADAM21Q9UKJ8 722 aa9.52□□□□□ -0.89
TMEM248-206ENST00000484751 MYH1P12882 1939 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 FRMD3A2A2Y4 597 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ERICH4A6NGS2 130 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 BTNL10A8MVZ5 291 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 F8W031 263 aaPredicted RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 CES2O00748 559 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ENC1O14682 589 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ENTPD3O75355 529 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 EPB41P11171 864 aaKnown RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 TNFRSF8P28908 595 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 LMAN1P49257 510 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 NAP1L1P55209 391 aaKnown RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ICA1Q05084 483 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 QRICH1Q2TAL8 776 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 FAM83BQ5T0W9 1011 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 EMBQ6PCB8 327 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 SUPT20HQ8NEM7 779 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 COG1Q8WTW3 980 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 LMBR1Q8WVP7 490 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 BAP1Q92560 729 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 TAF4BQ92750 862 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 HAS1Q92839 578 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 CAPZA3Q96KX2 299 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 RUFY1Q96T51 708 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 MMS19Q96T76 1030 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 LSM14BQ9BX40 385 aaKnown RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 ARMCX3Q9UH62 379 aaPredicted RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 KIAA1024Q9UPX6 916 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 COL2A1P02458 1487 aaPredicted RBP9.51□□□□□ -0.89
TMEM248-206ENST00000484751 FOCADQ5VW36 1801 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 UBE4BO95155 1302 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 AFF2P51816 1311 aa9.51□□□□□ -0.89
TMEM248-206ENST00000484751 GOLGA8KD6RF30 607 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 PDXKO00764 312 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 GFPT2O94808 682 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 AFPP02771 609 aaKnown RBP9.5□□□□□ -0.89
TMEM248-206ENST00000484751 CCDC172P0C7W6 258 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 EEF2P13639 858 aaKnown RBP9.5□□□□□ -0.89
TMEM248-206ENST00000484751 CYP11B2P19099 503 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 RPA1P27694 616 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 CIITAP33076 1130 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 ACTN2P35609 894 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 SREBF1P36956 1147 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 KLK7P49862 253 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 MMP14P50281 582 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 EPHB4P54760 987 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 TNNC1P63316 161 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 CYP27A1Q02318 531 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 KLHL30Q0D2K2 578 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 IKQ13123 557 aaPredicted RBP9.5□□□□□ -0.89
TMEM248-206ENST00000484751 ADAM9Q13443 819 aa9.5□□□□□ -0.89
TMEM248-206ENST00000484751 SYDE2Q5VT97 1194 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms