RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FGD1P98174 961 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ZNF200P98182 395 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 GHRHRQ02643 423 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 MFSD10Q14728 455 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 QRICH1Q2TAL8 776 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 RUFY3Q7L099 469 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 FBXO11Q86XK2 927 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 STAG2Q8N3U4 1231 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 TRIP12Q14669 1992 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-213ENST00000484112 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
CPSF4-213ENST00000484112 PNMA6FA0A0J9YX94 578 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 PI4K2BG5E9Z4 385 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 ZBTB43O43298 467 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 GPR37L1O60883 481 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-213ENST00000484112 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-213ENST00000484112 EVCP57679 992 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 PTK7Q13308 1070 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF4-213ENST00000484112 WNT8BQ93098 351 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 IWS1Q96ST2 819 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 C17orf80Q9BSJ5 609 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 KATNAL1Q9BW62 490 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 C11orf16Q9NQ32 467 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 CYP46A1Q9Y6A2 500 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 NID2Q14112 1375 aa11.52□□□□□ -0.57
CPSF4-213ENST00000484112 CHD9Q3L8U1 2897 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 EFCAB14O75071 495 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 LGR5O75473 907 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 EIF3JO75822 258 aaKnown RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 CFBP00751 764 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 NR3C2P08235 984 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 IL9P15248 144 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 RBL2Q08999 1139 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 LAMC2Q13753 1193 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 EP400NLQ6ZTU2 488 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 GJD3Q8N144 294 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 RRP36Q96EU6 259 aaKnown RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 UIMC1Q96RL1 719 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 SEC63Q9UGP8 760 aaKnown RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-213ENST00000484112 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
CPSF4-213ENST00000484112 COL4A4P53420 1690 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-213ENST00000484112 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 CYTH3O43739 400 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 AMHP03971 560 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 THPOP40225 353 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 MBTPS1Q14703 1052 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 RTN1Q16799 776 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 TRIM71Q2Q1W2 868 aaKnown RBP11.5□□□□□ -0.57
CPSF4-213ENST00000484112 LEXMQ3ZCV2 418 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-213ENST00000484112 TRAF7Q6Q0C0 670 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 Q6ZUG5 572 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-213ENST00000484112 DBF4BQ8NFT6 615 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 PPTC7Q8NI37 304 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-213ENST00000484112 PIGSQ96S52 555 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 PXMP2Q9NR77 195 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 INSL6Q9Y581 213 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 NCOR1O75376 2440 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
CPSF4-213ENST00000484112 KLF18A0A0U1RQI7 1052 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 RSPH10B2B2RC85 870 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 HAS3O00219 553 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 UPP2O95045 317 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 F2P00734 622 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 RSPH10BP0C881 870 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 HSD17B4P51659 736 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 HIC1Q14526 733 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
CPSF4-213ENST00000484112 FAM178BQ8IXR5 827 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 BRF1Q92994 677 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-213ENST00000484112 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 MYL10Q9BUA6 226 aa11.49□□□□□ -0.57
CPSF4-213ENST00000484112 CHD7Q9P2D1 2997 aa11.48□□□□□ -0.57
CPSF4-213ENST00000484112 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
CPSF4-213ENST00000484112 GOLGA8AA7E2F4 631 aa11.48□□□□□ -0.57
CPSF4-213ENST00000484112 GOLGA8BA8MQT2 603 aa11.48□□□□□ -0.57
CPSF4-213ENST00000484112 H3BQ06 376 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-213ENST00000484112 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms