RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 SRRTQ9BXP5 876 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 VPS16Q9H269 839 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TMX1Q9H3N1 280 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZNF408Q9H9D4 720 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 POLD4Q9HCU8 107 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 TAB2Q9NYJ8 693 aa9.87□□□□□ -0.83
CDC42SE1-204ENST00000483763 CHMP2AO43633 222 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 USP14P54578 494 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 RPS6P62753 249 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 PABPC4Q13310 644 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 E4F1Q66K89 784 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 CNNM4Q6P4Q7 775 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 TMEM139Q8IV31 216 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 P2RX5Q93086 422 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 DHTKD1Q96HY7 919 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 HSD17B14Q9BPX1 270 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 NT5C3AQ9H0P0 336 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 TRMT1Q9NXH9 659 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 TBC1D7Q9P0N9 293 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 LIMA1Q9UHB6 759 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 R3HCC1Q9Y3T6 440 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 AFG3L2Q9Y4W6 797 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 PEX10O60683 326 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 ITGBL1O95965 494 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 HSPA6P17066 643 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 MRPS9P82933 396 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 COASYQ13057 564 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 VGLL4Q14135 290 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 REPS2Q8NFH8 660 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 SYTL5Q8TDW5 730 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 IPO4Q8TEX9 1081 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLC5A5Q92911 643 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 C16orf45Q96MC5 204 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 TAAR1Q96RJ0 339 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 EIF2AK1Q9BQI3 630 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 WDR11Q9BZH6 1224 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 WRAP73Q9P2S5 460 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 KDM3AQ9Y4C1 1321 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 PCDHA2Q9Y5H9 948 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 PPP2R3BQ9Y5P8 575 aa9.86□□□□□ -0.83
CDC42SE1-204ENST00000483763 RPTORQ8N122 1335 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 PITPNM2Q9BZ72 1349 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 N4BP3O15049 544 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 SLITRK3O94933 977 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 CCNE1P24864 410 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 CTTNQ14247 550 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 SUPT20HL1Q3ZLR7 823 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 DNTTIP2Q5QJE6 756 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 LRCH2Q5VUJ6 765 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 HAUS3Q68CZ6 603 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 CENPPQ6IPU0 288 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 GPBP1Q86WP2 473 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 TRERF1Q96PN7 1200 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZNF214Q9UL59 606 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 ADAMTS5Q9UNA0 930 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 SNCAIPQ9Y6H5 919 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 DOCK1Q14185 1865 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 WDR90Q96KV7 1748 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 IPO5O00410 1097 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 GHRHRQ02643 423 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 RBL2Q08999 1139 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 STIM1Q13586 685 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 TMEM132BQ14DG7 1078 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 COBLL1Q53SF7 1204 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 B3GNT9Q6UX72 402 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 MOB2Q70IA6 237 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 KRT26Q7Z3Y9 468 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 TEX2Q8IWB9 1127 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 SMC1BQ8NDV3 1235 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 PIGOQ8TEQ8 1089 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 C12orf42Q96LP6 360 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 CTAGE1Q96RT6 745 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZNF577Q9BSK1 485 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 BHMT2Q9H2M3 363 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 AS3MTQ9HBK9 375 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 KCNH7Q9NS40 1196 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 PANK4Q9NVE7 773 aa9.85□□□□□ -0.83
CDC42SE1-204ENST00000483763 RLFQ13129 1914 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 ZC3H4Q9UPT8 1303 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 GYPCP04921 128 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 ERCC3P19447 782 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 EIF2AK2P19525 551 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 CASP5P51878 434 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 PPP2R5CQ13362 524 aa9.84□□□□□ -0.83
CDC42SE1-204ENST00000483763 USP50Q70EL3 339 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms