RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 B4GALT4O60513 344 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 ATP9AO75110 1047 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 ITGB8P26012 769 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 NLRP5P59047 1200 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 ST3GAL1Q11201 340 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 RABEP1Q15276 862 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 NSUN7Q8NE18 718 aaKnown RBP20.54■□□□□ 0.88
HDAC6-225ENST00000483506 CYP2W1Q8TAV3 490 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 GPR20Q99678 358 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 KATNAL1Q9BW62 490 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 KCNH7Q9NS40 1196 aa20.54■□□□□ 0.88
HDAC6-225ENST00000483506 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
HDAC6-225ENST00000483506 CIITAP33076 1130 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 MDM2Q00987 491 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-225ENST00000483506 HABP4Q5JVS0 413 aaKnown RBP20.53■□□□□ 0.88
HDAC6-225ENST00000483506 RASGRP4Q8TDF6 673 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 WASF1Q92558 559 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 LBHD1Q9BQE6 289 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-225ENST00000483506 C16orf70Q9BSU1 422 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 PCDH10Q9P2E7 1040 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 NFASCO94856 1347 aa20.53■□□□□ 0.88
HDAC6-225ENST00000483506 IGLV3-22A0A075B6J6 115 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 FAM86B1E9PN63 330 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 SORBS3O60504 671 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 TIMP1P01033 207 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 FAM86B2P0C5J1 330 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 ZNF286BP0CG31 522 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 RAG1P15918 1043 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 PSEN2P49810 448 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 BLIDQ8IZY5 108 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 TBC1D32Q96NH3 1257 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 TRPV6Q9H1D0 765 aa20.52■□□□□ 0.88
HDAC6-225ENST00000483506 ORC3Q9UBD5 711 aaPredicted RBP20.52■□□□□ 0.88
HDAC6-225ENST00000483506 NOP56O00567 594 aaKnown RBP20.51■□□□□ 0.87
HDAC6-225ENST00000483506 EDIL3O43854 480 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 LGALS2P05162 132 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 SUPT20HL2P0C7V6 817 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 MFSD10Q14728 455 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 BADQ92934 168 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 ZSCAN31Q96LW9 406 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-225ENST00000483506 AGO4Q9HCK5 861 aaKnown RBP20.51■□□□□ 0.87
HDAC6-225ENST00000483506 TRMT13Q9NUP7 481 aaKnown RBP20.51■□□□□ 0.87
HDAC6-225ENST00000483506 LAMA3Q16787 3333 aa20.51■□□□□ 0.87
HDAC6-225ENST00000483506 ARP10275 920 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 XBP1P17861 261 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 USP11P51784 963 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 SETQ01105 290 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-225ENST00000483506 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 MFSD5Q6N075 450 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 UBE2OQ9C0C9 1292 aaKnown RBP20.5■□□□□ 0.87
HDAC6-225ENST00000483506 SH2B1Q9NRF2 756 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-225ENST00000483506 TELO2Q9Y4R8 837 aa20.5■□□□□ 0.87
HDAC6-225ENST00000483506 HOXC8P31273 242 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 ZNF76P36508 570 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 ITGB3BPQ13352 177 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-225ENST00000483506 FAM47CQ5HY64 1035 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 LENG9Q96B70 501 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 LLPHQ9BRT6 129 aaKnown RBP20.49■□□□□ 0.87
HDAC6-225ENST00000483506 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
HDAC6-225ENST00000483506 BACH2Q9BYV9 841 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 JPH1Q9HDC5 661 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-225ENST00000483506 GTF2IRD1Q9UHL9 959 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 KCNJ14Q9UNX9 436 aa20.49■□□□□ 0.87
HDAC6-225ENST00000483506 H3BRB1 525 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 JAK2O60674 1132 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 PLA2G4DQ86XP0 818 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 TDHQ8IZJ6 230 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 SEPT1Q8WYJ6 367 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 SDF4Q9BRK5 362 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 HIPK3Q9H422 1215 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 TUT1Q9H6E5 874 aaKnown RBP20.48■□□□□ 0.87
HDAC6-225ENST00000483506 HDAC6Q9UBN7 1215 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 SLC9A2Q9UBY0 812 aa20.48■□□□□ 0.87
HDAC6-225ENST00000483506 GSTTP1A0A1W2PQM5 241 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 DTNBO60941 627 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 FPGSQ05932 587 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-225ENST00000483506 KRT25Q7Z3Z0 450 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 C7orf31Q8N865 590 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 TBCKQ8TEA7 893 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 PKD2L1Q9P0L9 805 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 EMSYQ7Z589 1322 aa20.47■□□□□ 0.87
HDAC6-225ENST00000483506 TANC1Q9C0D5 1861 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 CYP3A7-CYP3A51PA0A087WV96 503 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 DHX15O43143 795 aaKnown RBP20.46■□□□□ 0.87
HDAC6-225ENST00000483506 ST18O60284 1047 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 LGR5O75473 907 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 CYP3A7P24462 503 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 TCF7P36402 384 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-225ENST00000483506 MOXD1Q6UVY6 613 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 CCDC83Q8IWF9 413 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 PPP1R13LQ8WUF5 828 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 MBOAT7Q96N66 472 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 PPP1R12CQ9BZL4 782 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 GJB4Q9NTQ9 266 aa20.46■□□□□ 0.87
HDAC6-225ENST00000483506 ZNF215Q9UL58 517 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-225ENST00000483506 IPO5O00410 1097 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms