RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CRTAC1Q9NQ79 661 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 KLHL14Q9P2G3 628 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 SUPT16HQ9Y5B9 1047 aaKnown RBP4.97□□□□□ -1.61
LRCH3-217ENST00000483442 C10orf71Q711Q0 1435 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 NSD3Q9BZ95 1437 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 CGNL1Q0VF96 1302 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 PCDH11XQ9BZA7 1347 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 PCDH11YQ9BZA8 1340 aa4.97□□□□□ -1.61
LRCH3-217ENST00000483442 CNTNAP1P78357 1384 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 OTOL1A6NHN0 477 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 IRS4O14654 1257 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 FOXD2O60548 495 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 RPS6KA4O75676 772 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 DDNO94850 711 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 PNLIPP16233 465 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 KRTAP10-2P60368 255 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 RNF4P78317 190 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 RRS1Q15050 365 aaKnown RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 GK5Q6ZS86 529 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 NLRC3Q7RTR2 1065 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 SIGLEC10Q96LC7 697 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 GFOD1Q9NXC2 390 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 TMOD3Q9NYL9 352 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 SRP68Q9UHB9 627 aaKnown RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 CICQ96RK0 1608 aaPredicted RBP4.96□□□□□ -1.62
LRCH3-217ENST00000483442 MEGF6O75095 1541 aa4.96□□□□□ -1.62
LRCH3-217ENST00000483442 C4BP0C0L5 1744 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SBNO2Q9Y2G9 1366 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SSU72P8A0A1W2PR75 194 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 HRKO00198 91 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 N4BP3O15049 544 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 NME1P15531 152 aaKnown RBP4.95□□□□□ -1.62
LRCH3-217ENST00000483442 CHMP4BP1P59074 171 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 ERVFRD-1P60508 538 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 MAP2K1Q02750 393 aaPredicted RBP4.95□□□□□ -1.62
LRCH3-217ENST00000483442 GRM1Q13255 1194 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 HSP90AB2PQ58FF8 381 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 LDLRAD1Q5T700 205 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 IGDCC3Q8IVU1 814 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 TTLL6Q8N841 843 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SYT8Q8NBV8 401 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SLC9A7Q96T83 725 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 CHST7Q9NS84 486 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 SIRT5Q9NXA8 310 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 TERF2IPQ9NYB0 399 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 IRAK3Q9Y616 596 aa4.95□□□□□ -1.62
LRCH3-217ENST00000483442 WDR33Q9C0J8 1336 aaKnown RBP4.95□□□□□ -1.62
LRCH3-217ENST00000483442 DOT1LQ8TEK3 1739 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 RAB3GAP2Q9H2M9 1393 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 C5P01031 1676 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 FAM86C2PA6NEL3 165 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 C9IYK1 514 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 SHOXO15266 292 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 CLEC3AO75596 197 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 ACRP10323 421 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 TM4SF1P30408 202 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 AFF3P51826 1226 aaKnown RBP4.94□□□□□ -1.62
LRCH3-217ENST00000483442 NCKAP1LP55160 1127 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 DDR1Q08345 913 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 CRTC3Q6UUV7 619 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 FEZF2Q8TBJ5 459 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 FCRL2Q96LA5 508 aaPredicted RBP4.94□□□□□ -1.62
LRCH3-217ENST00000483442 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 AP5S1Q9NUS5 200 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 PODXL2Q9NZ53 605 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
LRCH3-217ENST00000483442 H0YIN7 160 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 RFXAPO00287 272 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 POLRMTO00411 1230 aaKnown RBP4.93□□□□□ -1.62
LRCH3-217ENST00000483442 TNFRSF10CO14798 259 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 ZNF205O95201 554 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 MSL3P1P0C860 447 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 VAV1P15498 845 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 PRKCAP17252 672 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 MRPL58Q14197 206 aaKnown RBP4.93□□□□□ -1.62
LRCH3-217ENST00000483442 RTP2Q5QGT7 225 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 LDHDQ86WU2 507 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 FAM129CQ86XR2 697 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 C2CD5Q86YS7 1000 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 TP53I13Q8NBR0 393 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-217ENST00000483442 MZB1Q8WU39 189 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 ZNF622Q969S3 477 aaKnown RBP eCLIP4.93□□□□□ -1.626e-18■□□□□ 10.5
LRCH3-217ENST00000483442 EAF1Q96JC9 268 aaPredicted RBP4.93□□□□□ -1.62
LRCH3-217ENST00000483442 JMJD8Q96S16 334 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 TNFRSF10DQ9UBN6 386 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 GGT7Q9UJ14 662 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 ABT1Q9ULW3 272 aaKnown RBP4.93□□□□□ -1.62
LRCH3-217ENST00000483442 CD163L1Q9NR16 1453 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 PASKQ96RG2 1323 aa4.93□□□□□ -1.62
LRCH3-217ENST00000483442 USP54Q70EL1 1684 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 QRICH2Q9H0J4 1663 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 MEIS3P2A8K0S8 358 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 NUDT19A8MXV4 375 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 PPM1GO15355 546 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-217ENST00000483442 SERPINB2P05120 415 aa4.92□□□□□ -1.62
LRCH3-217ENST00000483442 MCM4P33991 863 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms