RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 SLC9A1P19634 815 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 TPP2P29144 1249 aaPredicted RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 CD96P40200 585 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 HTRA3P83110 453 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 LACTBP83111 547 aaPredicted RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 PDCD1Q15116 288 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 SEC23AQ15436 765 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 BROXQ5VW32 411 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 NXNQ6DKJ4 435 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 OTOP1Q7RTM1 612 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 C1orf162Q8NEQ5 155 aaPredicted RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 SLC5A5Q92911 643 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 RELTQ969Z4 430 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 MENTQ9BUN1 341 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 SLC12A5Q9H2X9 1139 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 OBP2AQ9NY56 170 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 EBF1Q9UH73 591 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 DDX20Q9UHI6 824 aaKnown RBP4.8□□□□□ -1.64
CLCC1-209ENST00000482889 TCFL5Q9UL49 500 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 ZKSCAN5Q9Y2L8 839 aa4.8□□□□□ -1.64
CLCC1-209ENST00000482889 ARID1BQ8NFD5 2236 aaPredicted RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ZNF561-AS1K7EIQ3 104 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 NKRFO15226 690 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CAND2O75155 1236 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ESR1P03372 595 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 RNASE1P07998 156 aaKnown RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 GPR3P46089 330 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 KPNA1P52294 538 aaPredicted RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 SCAND1P57086 179 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 KCNAB2Q13303 367 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 IKZF1Q13422 519 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 BIRC2Q13490 618 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 LAPTM5Q13571 262 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 GALEQ14376 348 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 LRRC32Q14392 662 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 SART3Q15020 963 aaKnown RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 EEF1DP3Q658K8 133 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 TMPRSS7Q7RTY8 843 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CPA6Q8N4T0 437 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 C2orf69Q8N8R5 385 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 UBE2FQ969M7 185 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 FMNL2Q96PY5 1086 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 PSMD1Q99460 953 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ELF4Q99607 663 aaPredicted RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ALG1Q9BT22 464 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 TRIT1Q9H3H1 467 aaKnown RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CABP5Q9NP86 173 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
CLCC1-209ENST00000482889 CATSPERZQ9NTU4 200 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 GPATCH2Q9NW75 528 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 FBLN5Q9UBX5 448 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ADAMTS6Q9UKP5 1117 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 PCDHA11Q9Y5I1 949 aa4.79□□□□□ -1.64
CLCC1-209ENST00000482889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 E2F8A0AVK6 867 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 WTIPA6NIX2 430 aaPredicted RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 VSTM5A8MXK1 200 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 BIN1O00499 593 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 ZRANB2O95218 330 aaKnown RBP eCLIP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 PF4V1P10720 104 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 RBP3P10745 1247 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 KRT15P19012 456 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 FPR2P25090 351 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 GRK2P25098 689 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 GRK3P35626 688 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 TEKQ02763 1124 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 ZP2Q05996 745 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 LSAMPQ13449 338 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 TERF2Q15554 542 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 KIZQ2M2Z5 673 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 PGM2L1Q6PCE3 622 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 SLC4A10Q6U841 1118 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 EPM2AIP1Q7L775 607 aaPredicted RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 RBM12BQ8IXT5 1001 aaKnown RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 FLAD1Q8NFF5 587 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 MORC4Q8TE76 937 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 CHAMP1Q96JM3 812 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 SLC13A1Q9BZW2 595 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 MYH16Q9H6N6 1097 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 RC3H2Q9HBD1 1191 aaKnown RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 ATP13A1Q9HD20 1204 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 BTG4Q9NY30 223 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 CLDND1Q9NY35 253 aa4.78□□□□□ -1.64
CLCC1-209ENST00000482889 TIMM13Q9Y5L4 95 aaPredicted RBP4.78□□□□□ -1.64
CLCC1-209ENST00000482889 FAM47E-STBD1D6RA91 191 aa4.77□□□□□ -1.65
CLCC1-209ENST00000482889 PAPLNO95428 1278 aa4.77□□□□□ -1.65
CLCC1-209ENST00000482889 NAT1P18440 290 aa4.77□□□□□ -1.65
CLCC1-209ENST00000482889 LPOP22079 712 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms