RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 NBNO60934 754 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 BAIAP3O94812 1187 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 LGALS2P05162 132 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 KCNA2P16389 499 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 EVCP57679 992 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 LRRC8DQ7L1W4 858 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 GIMAP8Q8ND71 665 aaPredicted RBP11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 NOD1Q9Y239 953 aa11.18□□□□□ -0.62
TMEM39A-207ENST00000482162 UNC80Q8N2C7 3258 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 ATP9AO75110 1047 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 ACTN1P12814 892 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 FOSL2P15408 326 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 POU3F3P20264 500 aaPredicted RBP11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 CDC27P30260 824 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 RABGGTBP53611 331 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 ADGRE1Q14246 886 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 RTN1Q16799 776 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 ERICH6BQ5W0A0 696 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 WWC2Q6AWC2 1192 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 RAB11FIP4Q86YS3 637 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 RNPEPQ9H4A4 650 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 JADE2Q9NQC1 790 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 TTC28Q96AY4 2481 aa11.17□□□□□ -0.62
TMEM39A-207ENST00000482162 NID2Q14112 1375 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 STXBP3O00186 592 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 CAND2O75155 1236 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 FOSP01100 380 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 MYOGP15173 224 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 ZNF618Q5T7W0 954 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 CRYGNQ8WXF5 182 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 BARHL2Q9NY43 387 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
TMEM39A-207ENST00000482162 TANC1Q9C0D5 1861 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 CDH23Q9H251 3354 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 SORBS3O60504 671 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 UBE2SQ16763 222 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 CNKSR3Q6P9H4 555 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 HEATR3Q7Z4Q2 680 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
TMEM39A-207ENST00000482162 EMSYQ7Z589 1322 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 ESYT2A0FGR8 921 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 SPDYE3A6NKU9 549 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 MEIS1O00470 390 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 TREHO43280 583 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 EFCAB14O75071 495 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 LGR5O75473 907 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 CPA1P15085 419 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 RPS6KB1P23443 525 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 WDR5P61964 334 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 TAP1Q03518 808 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 MTMR1Q13613 665 aa11.14□□□□□ -0.63
TMEM39A-207ENST00000482162 NTRK3Q16288 839 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms