RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 C2orf69Q8N8R5 385 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 SEC14L1Q92503 715 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 CD244Q9BZW8 370 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 SMOC1Q9H4F8 434 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 CABP5Q9NP86 173 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 DSEQ9UL01 958 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 SRPK3Q9UPE1 567 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 ZNF652Q9Y2D9 606 aa8.04□□□□□ -1.12
SF3B1-210ENST00000482158 F8W031 263 aaPredicted RBP8.03□□□□□ -1.12
SF3B1-210ENST00000482158 LTFP02788 710 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 MPOP05164 745 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 ID4P47928 161 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 EPHA5P54756 1037 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 IGBP1P78318 339 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 CYP4F22Q6NT55 531 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 PRPF38AQ8NAV1 312 aaKnown RBP8.03□□□□□ -1.12
SF3B1-210ENST00000482158 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 SLC6A17Q9H1V8 727 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 ASH2LQ9UBL3 628 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 CARMIL2Q6F5E8 1435 aa8.03□□□□□ -1.12
SF3B1-210ENST00000482158 TCRBV5S2A0A599 114 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 ZNF503-AS2A6NEH8 195 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 KRIT1O00522 736 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 NEMP1O14524 444 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 DVL2O14641 736 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 CDK11BP21127 795 aaKnown RBP8.02□□□□□ -1.13
SF3B1-210ENST00000482158 ADCYAP1R1P41586 468 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 SCNN1BP51168 640 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 EVA1CP58658 441 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 YBX1P67809 324 aaKnown RBP8.02□□□□□ -1.13
SF3B1-210ENST00000482158 NR1I3Q14994 352 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 RAB3GAP1Q15042 981 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 SEC23AQ15436 765 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 CHRNA2Q15822 529 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 KCNMB1Q16558 191 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 ANKRD13AQ8IZ07 590 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 CLEC4DQ8WXI8 215 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 PEX11GQ96HA9 241 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 PDGFDQ9GZP0 370 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-210ENST00000482158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
SF3B1-210ENST00000482158 H2AFY2Q9P0M6 372 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-210ENST00000482158 PLA2G2DQ9UNK4 145 aa8.02□□□□□ -1.13
SF3B1-210ENST00000482158 SLC12A8A0AV02 714 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 MAPKAPK2P49137 400 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 PRR5P85299 388 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 ARHGAP44Q17R89 818 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 PLEKHN1Q494U1 663 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-210ENST00000482158 KCTD1Q719H9 257 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 MILR1Q7Z6M3 343 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 IRF2BP1Q8IU81 584 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 ARRDC4Q8NCT1 418 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 CHTF18Q8WVB6 975 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 STAG1Q8WVM7 1258 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 TSPAN17Q96FV3 270 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 BOCQ9BWV1 1114 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 AP5M1Q9H0R1 490 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 MYOTQ9UBF9 498 aa8.01□□□□□ -1.13
SF3B1-210ENST00000482158 OR14I1A6ND48 311 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 FAM90A27PA6NNH2 459 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 BIN1O00499 593 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 PPM1GO15355 546 aaPredicted RBP8□□□□□ -1.13
SF3B1-210ENST00000482158 PDE6BP35913 854 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 TUSC3Q13454 348 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 STAT4Q14765 748 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 FIGNQ5HY92 759 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 NBPF11Q86T75 865 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 PHOSPHO1Q8TCT1 267 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 DLG3Q92796 817 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 BCAS3Q9H6U6 928 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 SPTLC3Q9NUV7 552 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 OXSMQ9NWU1 459 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 THG1LQ9NWX6 298 aaKnown RBP8□□□□□ -1.13
SF3B1-210ENST00000482158 NUDT5Q9UKK9 219 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 PCDHB4Q9Y5E5 795 aa8□□□□□ -1.13
SF3B1-210ENST00000482158 PHLDB1Q86UU1 1377 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 GAS7O60861 476 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 CLASP2O75122 1294 aaKnown RBP7.99□□□□□ -1.13
SF3B1-210ENST00000482158 FKBP9O95302 570 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 ANAPC15P60006 121 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 IRF9Q00978 393 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 CPZQ66K79 652 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 FKBP9P1Q75LS8 142 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 FAM168AQ92567 244 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 USP7Q93009 1102 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 LIN37Q96GY3 246 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-210ENST00000482158 GPR101Q96P66 508 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-210ENST00000482158 TTC1Q99614 292 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 ZNF552Q9H707 407 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-210ENST00000482158 IFT22Q9H7X7 185 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 MCM8Q9UJA3 840 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 ZKSCAN5Q9Y2L8 839 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 B3GALT1Q9Y5Z6 326 aa7.99□□□□□ -1.13
SF3B1-210ENST00000482158 ACOT7O00154 380 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 GPR39O43194 453 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 TGM5O43548 720 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 ZEB2O60315 1214 aa7.98□□□□□ -1.13
SF3B1-210ENST00000482158 MAFKO60675 156 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms