RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 DCP1AQ9NPI6 582 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PPANQ9NQ55 473 aaKnown RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SPHKAPQ2M3C7 1700 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 CROCC2H7BZ55 1655 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PNPLA7Q6ZV29 1317 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PLA2G4BP0C869 781 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 HSPA6P17066 643 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 MXI1P50539 228 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 MTERF2Q49AM1 385 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TDRD7Q8NHU6 1098 aaKnown RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 FANCLQ9NW38 375 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PCDHB4Q9Y5E5 795 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-216ENST00000481242 ORC4O43929 436 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 IFNB1P01574 187 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 KRT15P19012 456 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 CDC25BP30305 580 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 ELF1P32519 619 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 SLC20A2Q08357 652 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 PRPSAP1Q14558 356 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 ARHGAP24Q8N264 748 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 NEDD1Q8NHV4 660 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 TSC1Q92574 1164 aa10.3□□□□□ -0.76
GARNL3-216ENST00000481242 ASB14A6NK59 587 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 F8W8V4 182 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 SRGAP2BP0DMP2 458 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 HSPA1LP34931 641 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 PKP1Q13835 747 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 DENND2CQ68D51 928 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 KLHL7Q8IXQ5 586 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 PRPF31Q8WWY3 499 aaKnown RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 TMEM47Q9BQJ4 181 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 CARD6Q9BX69 1037 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 RPF1Q9H9Y2 349 aaKnown RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 LRRC4Q9HBW1 653 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 LCMT1Q9UIC8 334 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 CD163L1Q9NR16 1453 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 C2orf40Q9H1Z8 148 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 CACYBPQ9HB71 228 aaKnown RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 VPS18Q9P253 973 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 AFG3L2Q9Y4W6 797 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 ENTPD3O75355 529 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 UBXN2AP68543 259 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 BFSP1Q12934 665 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 PFKFB3Q16875 520 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 MFSD14CQ5VZR4 134 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 ZNF449Q6P9G9 518 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 ENOX1Q8TC92 643 aaKnown RBP10.29□□□□□ -0.76
GARNL3-216ENST00000481242 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 CDKL2Q92772 493 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 GCNAQ96QF7 691 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 APOL6Q9BWW8 343 aa10.29□□□□□ -0.76
GARNL3-216ENST00000481242 CIB2O75838 187 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 PHKA2P46019 1235 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 MTMR1Q13613 665 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ZKSCAN8Q15776 578 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 CATSPER4Q7RTX7 472 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 LPAR1Q92633 364 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 TRIM31Q9BZY9 425 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 THAP9Q9H5L6 903 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ACAD9Q9H845 621 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 RNF146Q9NTX7 359 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 GINM1Q9NU53 330 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 SEL1LQ9UBV2 794 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 JRKLQ9Y4A0 524 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 KRIT1O00522 736 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 KCNK3O14649 394 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 TFAMQ00059 246 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 CCDC38Q502W7 563 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 GAS2L3Q86XJ1 694 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 EFCAB13Q8IY85 973 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 PPFIBP2Q8ND30 876 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 FAM149B1Q96BN6 582 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 RNF14Q9UBS8 474 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 BCAP29Q9UHQ4 241 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 RWDD2AQ9UIY3 292 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 HMGB1P1B2RPK0 211 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 C19orf81C9J6K1 198 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 ATP2C2O75185 946 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 XPAP23025 273 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 RPS12P25398 132 aaKnown RBP10.28□□□□□ -0.76
GARNL3-216ENST00000481242 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
GARNL3-216ENST00000481242 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms