RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ARFGEF2Q9Y6D5 1785 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 SORBS3O60504 671 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 CCDC122Q5T0U0 273 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 EMILIN3Q9NT22 766 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 COL22A1Q8NFW1 1626 aaPredicted RBP21.19■□□□□ 0.98
CCM2-214ENST00000481194 HOXD10P28358 340 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 SHMT1P34896 483 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 PRPF4BQ13523 1007 aaKnown RBP21.19■□□□□ 0.98
CCM2-214ENST00000481194 OR8K1Q8NGG5 319 aa21.19■□□□□ 0.98
CCM2-214ENST00000481194 DDTLA6NHG4 134 aaPredicted RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 MEIS1O00470 390 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 STAM2O75886 525 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 CTTNQ14247 550 aaKnown RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 CGNQ9P2M7 1197 aaKnown RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 CLCN1P35523 988 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 FAM47CQ5HY64 1035 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 ATP6V0A4Q9HBG4 840 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 IPO5O00410 1097 aaKnown RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 DNA2P51530 1060 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 KLHL30Q0D2K2 578 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 MAN2A1Q16706 1144 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 GUCA1BQ9UMX6 200 aa21.18■□□□□ 0.98
CCM2-214ENST00000481194 USP50Q70EL3 339 aaPredicted RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 CTNNBL1Q8WYA6 563 aaPredicted RBP21.18■□□□□ 0.98
CCM2-214ENST00000481194 MAFGO15525 162 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 ICAM1P05362 532 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 NR2F2P24468 414 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 ERO1BQ86YB8 467 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 PPP1R9BQ96SB3 815 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 HNRNPDLO14979 420 aaKnown RBP21.17■□□□□ 0.98
CCM2-214ENST00000481194 XPOTO43592 962 aaKnown RBP21.17■□□□□ 0.98
CCM2-214ENST00000481194 QARSP47897 775 aaKnown RBP21.17■□□□□ 0.98
CCM2-214ENST00000481194 PSMC5P62195 406 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 CLEC10AQ8IUN9 316 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 POMGNT1Q8WZA1 660 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 RASAL2Q9UJF2 1139 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 TDP2O95551 362 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 SURF1Q15526 300 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 MOXD1Q6UVY6 613 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 BHMT2Q9H2M3 363 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 TMX1Q9H3N1 280 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 POTEMA6NI47 508 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 PROM2Q8N271 834 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 GOLPH3LQ9H4A5 285 aa21.17■□□□□ 0.98
CCM2-214ENST00000481194 GTF2A2P52657 109 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 TUBGCP2Q9BSJ2 902 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 CRACR2AQ9BSW2 395 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 NBPF9Q3BBW0 867 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 C11orf57Q6ZUT1 292 aaPredicted RBP21.16■□□□□ 0.98
CCM2-214ENST00000481194 GRAMD1CQ8IYS0 662 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 C1orf112Q9NSG2 853 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 CDC25AP30304 524 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 WNT10BO00744 389 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 CLUL1Q15846 466 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 MTERF2Q49AM1 385 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 SLFN12LQ6IEE8 588 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 JAKMIP2Q96AA8 810 aa21.16■□□□□ 0.98
CCM2-214ENST00000481194 BACE1P56817 501 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.15■□□□□ 0.98
CCM2-214ENST00000481194 ZNF302Q9NR11 478 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 AKT3Q9Y243 479 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 CRYBG1Q9Y4K1 1723 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 STAT1P42224 750 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 RHBDL3P58872 404 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 ZNF569Q5MCW4 686 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 ELOA2Q8IYF1 753 aaPredicted RBP21.15■□□□□ 0.98
CCM2-214ENST00000481194 GNAT1P11488 350 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 KIAA0753Q2KHM9 967 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 FAM186BQ8IYM0 893 aa21.15■□□□□ 0.98
CCM2-214ENST00000481194 AFPP02771 609 aaKnown RBP21.14■□□□□ 0.98
CCM2-214ENST00000481194 IGBP1P78318 339 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 LZTFL1Q9NQ48 299 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 SPEF2Q9C093 1822 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 ACTN2P35609 894 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 SHC4Q6S5L8 630 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 DYDC2Q96IM9 177 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 RIOX1Q9H6W3 641 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 TSKSQ9UJT2 592 aa21.14■□□□□ 0.98
CCM2-214ENST00000481194 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 GJA10Q969M2 543 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 KIAA1683Q9H0B3 1180 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 FAM207AQ9NSI2 230 aaPredicted RBP21.14■□□□□ 0.97
CCM2-214ENST00000481194 BZW2Q9Y6E2 419 aaKnown RBP21.14■□□□□ 0.97
CCM2-214ENST00000481194 DUOX1Q9NRD9 1551 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 SPDYE4A6NLX3 237 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 MYL7Q01449 175 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 RRAGAQ7L523 313 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 NAP1L3Q99457 506 aaPredicted RBP21.14■□□□□ 0.97
CCM2-214ENST00000481194 TBC1D12O60347 775 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 SREBF2Q12772 1141 aa21.14■□□□□ 0.97
CCM2-214ENST00000481194 AXDND1Q5T1B0 1012 aaPredicted RBP21.14■□□□□ 0.97
CCM2-214ENST00000481194 MACROD2A1Z1Q3 448 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 KCNB1Q14721 858 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 SYCE1Q8N0S2 351 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 KCND2Q9NZV8 630 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 TUBBP07437 444 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 EEPD1Q7L9B9 569 aa21.13■□□□□ 0.97
CCM2-214ENST00000481194 FHDC1Q9C0D6 1143 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms