RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ZEB2O60315 1214 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 GAS7O60861 476 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 DGKIO75912 1065 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 ZBTB48P10074 688 aaPredicted RBP7.16□□□□□ -1.26
UPF3A-207ENST00000481131 LSSP48449 732 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 IL2P60568 153 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 TMPRSS15P98073 1019 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 EXOSC10Q01780 885 aaKnown RBP7.16□□□□□ -1.26
UPF3A-207ENST00000481131 SPIRE1Q08AE8 756 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 RNF219Q5W0B1 726 aaPredicted RBP7.16□□□□□ -1.26
UPF3A-207ENST00000481131 HHIPL2Q6UWX4 724 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 NECAB2Q7Z6G3 386 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 CCDC120Q96HB5 630 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 SPTLC3Q9NUV7 552 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 OXSMQ9NWU1 459 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 SLC5A4Q9NY91 659 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 APOBEC2Q9Y235 224 aaKnown RBP7.16□□□□□ -1.26
UPF3A-207ENST00000481131 NACADO15069 1562 aa7.16□□□□□ -1.26
UPF3A-207ENST00000481131 A0A1W2PQ27 194 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 A0A1W2PQ64 194 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 A0A1W2PQC6 194 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 A0A1W2PQD8 194 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 DVL2O14641 736 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 CYP4F8P98187 520 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 MTMR1Q13613 665 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 ZNF792Q3KQV3 632 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 CBLL1Q75N03 491 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 SPATS2Q86XZ4 545 aaKnown RBP7.15□□□□□ -1.26
UPF3A-207ENST00000481131 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 TP53INP2Q8IXH6 220 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 UHMK1Q8TAS1 419 aaKnown RBP7.15□□□□□ -1.26
UPF3A-207ENST00000481131 PANK1Q8TE04 598 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 CD244Q9BZW8 370 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 EMC7Q9NPA0 242 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 GPR160Q9UJ42 338 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 ZKSCAN5Q9Y2L8 839 aa7.15□□□□□ -1.26
UPF3A-207ENST00000481131 THRAP3Q9Y2W1 955 aaKnown RBP7.15□□□□□ -1.26
UPF3A-207ENST00000481131 UNC13AQ9UPW8 1703 aa7.15□□□□□ -1.27
UPF3A-207ENST00000481131 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 TGM5O43548 720 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SART3Q15020 963 aaKnown RBP7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SEC23AQ15436 765 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 EMC4Q5J8M3 183 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 BICRALQ6AI39 1079 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SIRT2Q8IXJ6 389 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 RBM12BQ8IXT5 1001 aaKnown RBP7.14□□□□□ -1.27
UPF3A-207ENST00000481131 AGBL5Q8NDL9 886 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 BOCQ9BWV1 1114 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 ASPSCR1Q9BZE9 553 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 RXFP1Q9HBX9 757 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 METTL14Q9HCE5 456 aaKnown RBP7.14□□□□□ -1.27
UPF3A-207ENST00000481131 TNFRSF12AQ9NP84 129 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 DSEQ9UL01 958 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SRPK3Q9UPE1 567 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SIT1Q9Y3P8 196 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
UPF3A-207ENST00000481131 SLC12A8A0AV02 714 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 TADA3O75528 432 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 KRT37O76014 449 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 PRKD3O94806 890 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 S100BP04271 92 aaPredicted RBP7.13□□□□□ -1.27
UPF3A-207ENST00000481131 SLC6A11P48066 632 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 RBM10P98175 930 aaKnown RBP7.13□□□□□ -1.27
UPF3A-207ENST00000481131 ATP13A4Q4VNC1 1196 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 STEAP3Q658P3 488 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 RAVER1Q8IY67 606 aaKnown RBP7.13□□□□□ -1.27
UPF3A-207ENST00000481131 LILRA2Q8N149 483 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 MYLIPQ8WY64 445 aa7.13□□□□□ -1.27
UPF3A-207ENST00000481131 CCDC8Q9H0W5 538 aaPredicted RBP7.13□□□□□ -1.27
UPF3A-207ENST00000481131 SLC27A2O14975 620 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 PNLIPP16233 465 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 TXKP42681 527 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 KPNA1P52294 538 aaPredicted RBP7.12□□□□□ -1.27
UPF3A-207ENST00000481131 IRF9Q00978 393 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 FIGNQ5HY92 759 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 ODR4Q5SWX8 454 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 CPZQ66K79 652 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 RNF32Q9H0A6 362 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 RC3H2Q9HBD1 1191 aaKnown RBP7.12□□□□□ -1.27
UPF3A-207ENST00000481131 VTA1Q9NP79 307 aa7.12□□□□□ -1.27
UPF3A-207ENST00000481131 G3BP2Q9UN86 482 aaKnown RBP7.12□□□□□ -1.27
UPF3A-207ENST00000481131 BTBD11A6QL63 1104 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 KRIT1O00522 736 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 SGSM2O43147 1006 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 SRGAP3O43295 1099 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 LTFP02788 710 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 DBHP09172 617 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 RAC2P15153 192 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 SLC9A1P19634 815 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 SDHBP21912 280 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 SNX17Q15036 470 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 EFHBQ8N7U6 833 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 CNTD1Q8N815 330 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 DLG3Q92796 817 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 MTMR8Q96EF0 704 aa7.11□□□□□ -1.27
UPF3A-207ENST00000481131 CEP89Q96ST8 783 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms