RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 EPB41L1Q9H4G0 881 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 ECT2Q9H8V3 914 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 KIAA1210Q9ULL0 1709 aa11.28□□□□□ -0.6
PRPF4B-206ENST00000481109 KIF1BO60333 1816 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 SPATA31D3P0C874 917 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 MTHFSP49914 203 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 ZC3H6P61129 1189 aaKnown RBP11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 COPS2P61201 443 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 ZBTB17Q13105 803 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 PARP6Q2NL67 630 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 SPATA31D4Q6ZUB0 917 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 CNGA4Q8IV77 575 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 LSMEM2Q8N112 164 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 TMCO5AQ8N6Q1 288 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 FNDC8Q8TC99 324 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 UCMAQ8WVF2 138 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 RILPL2Q969X0 211 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 CDK5RAP3Q96JB5 506 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 HAUS4Q9H6D7 363 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 COMMD8Q9NX08 183 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 TSC22D4Q9Y3Q8 395 aa11.27□□□□□ -0.6
PRPF4B-206ENST00000481109 CYP2C9P11712 490 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 ZNF18P17022 549 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 SEPT7Q16181 437 aaKnown RBP11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 CCDC14Q49A88 953 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 FAM209AQ5JX71 171 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 SYCP2LQ5T4T6 812 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 ERMARDQ5T6L9 678 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 NAT14Q8WUY8 206 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 XPO6Q96QU8 1125 aaKnown RBP11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 IL25Q9H293 177 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 NUMBLQ9Y6R0 609 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 KIDINS220Q9ULH0 1771 aa11.27□□□□□ -0.61
PRPF4B-206ENST00000481109 SMIM31A0A1B0GVY4 71 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 TNFRSF10AO00220 468 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 NVLO15381 856 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PEX11AO75192 247 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 MYZAPP0CAP1 466 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 VAV1P15498 845 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 RPL17P18621 184 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PTDSS1P48651 473 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 DCTN2Q13561 401 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 NR1I3Q14994 352 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 MUM1Q2TAK8 710 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PHLDB2Q86SQ0 1253 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GRAMD2AQ8IUY3 354 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 SPERTQ8NA61 448 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PBKQ96KB5 322 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GSDMAQ96QA5 445 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PLCB1Q9NQ66 1216 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 FAM114A2Q9NRY5 505 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 ZMYND8Q9ULU4 1186 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GIT1Q9Y2X7 761 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 A8MUI8 341 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GOLGA8TH3BQL2 631 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 MFAP3LO75121 409 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 CYP1A1P04798 512 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 UBL4AP11441 157 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PTPN2P17706 415 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 RGS2P41220 211 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 CDK7P50613 346 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 EMP3P54852 163 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 TBL3Q12788 808 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 SPCS2Q15005 226 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 NDUFA5Q16718 116 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 IL23RQ5VWK5 629 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 KAZNQ674X7 775 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 OLFM4Q6UX06 510 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 PPFIBP1Q86W92 1011 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 CCDC110Q8TBZ0 833 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 USP6NLQ92738 828 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 ZNF317Q96PQ6 595 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 FAM129AQ9BZQ8 928 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 NKX1-2Q9UD57 310 aaPredicted RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 DMGDHQ9UI17 866 aaKnown RBP11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 RASAL2Q9UJF2 1139 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 ZNF711Q9Y462 761 aa11.26□□□□□ -0.61
PRPF4B-206ENST00000481109 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms