RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SP3Q02447 781 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 ZRSR1Q15695 479 aaKnown RBP19.77■□□□□ 0.76
UPF3A-206ENST00000480362 CAMK4Q16566 473 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 KRBA2Q6ZNG9 492 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 RASSF8Q8NHQ8 419 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 SNX29Q8TEQ0 813 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 USP6NLQ92738 828 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 DHX58Q96C10 678 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 CALML4Q96GE6 196 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 PLIN2Q99541 437 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 PYM1Q9BRP8 204 aaKnown RBP19.77■□□□□ 0.76
UPF3A-206ENST00000480362 UNC45AQ9H3U1 944 aa19.77■□□□□ 0.76
UPF3A-206ENST00000480362 CHMP2AO43633 222 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 KCNA2P16389 499 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 CCT6AP40227 531 aaKnown RBP19.76■□□□□ 0.75
UPF3A-206ENST00000480362 LACTBP83111 547 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-206ENST00000480362 RRAGBQ5VZM2 374 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 B3GNT9Q6UX72 402 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 MAMDC4Q6UXC1 1216 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 CNNM3Q8NE01 707 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 ERMNQ8TAM6 284 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 SDF4Q9BRK5 362 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 ARHGAP39Q9C0H5 1083 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 DISC1Q9NRI5 854 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 USP25Q9UHP3 1055 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 STK24Q9Y6E0 443 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 LRRC37A2A6NM11 1700 aa19.76■□□□□ 0.75
UPF3A-206ENST00000480362 KIAA1217Q5T5P2 1943 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 ACTN4O43707 911 aaKnown RBP19.75■□□□□ 0.75
UPF3A-206ENST00000480362 HOXC6P09630 235 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 RGS2P41220 211 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 GRB10Q13322 594 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 E2F4Q16254 413 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 FBXO16Q8IX29 292 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-206ENST00000480362 IQUBQ8NA54 791 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 SOCS4Q8WXH5 440 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 TRIM47Q96LD4 638 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 PNMA5Q96PV4 448 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 TNMDQ9H2S6 317 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 THSD7BQ9C0I4 1608 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 MGAMO43451 1857 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 NFASCO94856 1347 aa19.75■□□□□ 0.75
UPF3A-206ENST00000480362 SLC26A4O43511 780 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 SNAI1O95863 264 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-206ENST00000480362 SLFN14P0C7P3 912 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 TGFB3P10600 412 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 PLCG1P19174 1290 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 CYP2B6P20813 491 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 STAT6P42226 847 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 SP2Q02086 613 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 KIF22Q14807 665 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 EPHA7Q15375 998 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 ZSCAN23Q3MJ62 389 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 HAUS3Q68CZ6 603 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 MIER3Q7Z3K6 550 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 CDK5RAP3Q96JB5 506 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 SENP7Q9BQF6 1050 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 EIF2AK1Q9BQI3 630 aaKnown RBP19.74■□□□□ 0.75
UPF3A-206ENST00000480362 TINF2Q9BSI4 451 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 BCAS3Q9H6U6 928 aa19.74■□□□□ 0.75
UPF3A-206ENST00000480362 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-206ENST00000480362 DOCK3Q8IZD9 2030 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 CTAGE5O15320 804 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 MED24O75448 989 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 LETM1O95202 739 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-206ENST00000480362 KRT76Q01546 638 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 ECM1Q16610 540 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 HYIQ5T013 277 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 KANK3Q6NY19 840 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 KCNV1Q6PIU1 500 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 CATSPER3Q86XQ3 398 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 CEP57L1Q8IYX8 460 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 MSL3Q8N5Y2 521 aaKnown RBP19.73■□□□□ 0.75
UPF3A-206ENST00000480362 VTA1Q9NP79 307 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 TCEAL9Q9UHQ7 104 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 SYNGAP1Q96PV0 1343 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 KDM3AQ9Y4C1 1321 aa19.73■□□□□ 0.75
UPF3A-206ENST00000480362 MCM3APO60318 1980 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 GPR25O00155 361 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 SPATA31C1P0DKV0 1188 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 RPA1P27694 616 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 TMEM119Q4V9L6 283 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 NAALADL2Q58DX5 795 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 ZNF746Q6NUN9 644 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-206ENST00000480362 TAPT1Q6NXT6 567 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 PDXDC2PQ6P474 469 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 ELOA2Q8IYF1 753 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-206ENST00000480362 GIMAP8Q8ND71 665 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-206ENST00000480362 LRRC15Q8TF66 581 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 DYDC2Q96IM9 177 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 APBA2Q99767 749 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 HSD17B14Q9BPX1 270 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 POLR3CQ9BUI4 534 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-206ENST00000480362 NT5C3AQ9H0P0 336 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 JPH1Q9HDC5 661 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-206ENST00000480362 PDGFCQ9NRA1 345 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 RGL1Q9NZL6 768 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 FLRT1Q9NZU1 646 aa19.72■□□□□ 0.75
UPF3A-206ENST00000480362 DDX41Q9UJV9 622 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms