RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 POLR3EQ9NVU0 708 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 CABYRO75952 493 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 TDP2O95551 362 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 ASGR1P07306 291 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 MMP3P08254 477 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 CYFIP1Q7L576 1253 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 AFG1LQ8WV93 481 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 SPATA33Q96N06 139 aa22.4■■□□□ 1.18
LIME1-205ENST00000480139 KIF28PB7ZC32 967 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 IPO5O00410 1097 aaKnown RBP22.39■■□□□ 1.17
LIME1-205ENST00000480139 CAPN15O75808 1086 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 HSP90AA1P07900 732 aaKnown RBP22.39■■□□□ 1.17
LIME1-205ENST00000480139 TRAPPC10P48553 1259 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 ITGB3BPQ13352 177 aaPredicted RBP22.39■■□□□ 1.17
LIME1-205ENST00000480139 BECN1Q14457 450 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 HSDL1Q3SXM5 330 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 SDF4Q9BRK5 362 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 TBC1D22BQ9NU19 505 aa22.39■■□□□ 1.17
LIME1-205ENST00000480139 DDX25Q9UHL0 483 aaKnown RBP22.39■■□□□ 1.17
LIME1-205ENST00000480139 ELP1O95163 1332 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
LIME1-205ENST00000480139 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 CCNT1O60563 726 aaKnown RBP22.38■■□□□ 1.17
LIME1-205ENST00000480139 PPFIA4O75335 1185 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 PDIA4P13667 645 aaKnown RBP22.38■■□□□ 1.17
LIME1-205ENST00000480139 PURAQ00577 322 aaKnown RBP22.38■■□□□ 1.17
LIME1-205ENST00000480139 DGKDQ16760 1214 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 ZNF577Q9BSK1 485 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 BCAS3Q9H6U6 928 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 JPH1Q9HDC5 661 aaPredicted RBP22.38■■□□□ 1.17
LIME1-205ENST00000480139 FOXD4L1Q9NU39 408 aa22.38■■□□□ 1.17
LIME1-205ENST00000480139 MSH4O15457 936 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 SYT1P21579 422 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 ORC2Q13416 577 aaPredicted RBP22.37■■□□□ 1.17
LIME1-205ENST00000480139 SLC5A5Q92911 643 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 GLT1D1Q96MS3 346 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 RIT2Q99578 217 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 GPR20Q99678 358 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 PKD2L1Q9P0L9 805 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 SLC9A2Q9UBY0 812 aa22.37■■□□□ 1.17
LIME1-205ENST00000480139 SCN10AQ9Y5Y9 1956 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 NOP56O00567 594 aaKnown RBP22.36■■□□□ 1.17
LIME1-205ENST00000480139 TBX3O15119 743 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 DHX15O43143 795 aaKnown RBP22.36■■□□□ 1.17
LIME1-205ENST00000480139 SLC37A4O43826 429 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 C1orf53Q5VUE5 145 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 CXCL17Q6UXB2 119 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 ETNPPLQ8TBG4 499 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 SENP6Q9GZR1 1112 aaPredicted RBP22.36■■□□□ 1.17
LIME1-205ENST00000480139 KCNMB3Q9NPA1 279 aa22.36■■□□□ 1.17
LIME1-205ENST00000480139 NOL7Q9UMY1 257 aaKnown RBP22.36■■□□□ 1.17
LIME1-205ENST00000480139 SORBS3O60504 671 aa22.35■■□□□ 1.17
LIME1-205ENST00000480139 SNX17Q15036 470 aa22.35■■□□□ 1.17
LIME1-205ENST00000480139 FAM20AQ96MK3 541 aa22.35■■□□□ 1.17
LIME1-205ENST00000480139 MTG1Q9BT17 334 aaPredicted RBP22.35■■□□□ 1.17
LIME1-205ENST00000480139 SEZ6LQ9BYH1 1024 aa22.35■■□□□ 1.17
LIME1-205ENST00000480139 STARD7Q9NQZ5 370 aa22.35■■□□□ 1.17
LIME1-205ENST00000480139 ALPK3Q96L96 1907 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 VPS37CA5D8V6 355 aaPredicted RBP22.34■■□□□ 1.17
LIME1-205ENST00000480139 MYL3P08590 195 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 BRAPQ7Z569 592 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 SEPT1Q8WYJ6 367 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 HTATIP2Q9BUP3 242 aa22.34■■□□□ 1.17
LIME1-205ENST00000480139 STX6O43752 255 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 PSMD10O75832 226 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 F2P00734 622 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 KRT76Q01546 638 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 RILPL1Q5EBL4 403 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 ZNF746Q6NUN9 644 aaPredicted RBP22.33■■□□□ 1.17
LIME1-205ENST00000480139 SLC39A5Q6ZMH5 540 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 TCEAL9Q9UHQ7 104 aa22.33■■□□□ 1.17
LIME1-205ENST00000480139 A0A0U1RQG5 324 aaPredicted RBP22.32■■□□□ 1.16
LIME1-205ENST00000480139 GSTTP1A0A1W2PQM5 241 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 WNT7AO00755 349 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 NEMFO60524 1076 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 GAS7O60861 476 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 ATG7O95352 703 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 CCNE2O96020 404 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 TCF7P36402 384 aaPredicted RBP22.32■■□□□ 1.16
LIME1-205ENST00000480139 ACTR2P61160 394 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 TTC38Q5R3I4 469 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 LRCH2Q5VUJ6 765 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
LIME1-205ENST00000480139 SLFN12Q8IYM2 578 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 SLC43A3Q8NBI5 491 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 KAT2BQ92831 832 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 C16orf70Q9BSU1 422 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 KATNAL1Q9BW62 490 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 TEKT3Q9BXF9 490 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 MTMR6Q9Y217 621 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 TELO2Q9Y4R8 837 aa22.32■■□□□ 1.16
LIME1-205ENST00000480139 EMSYQ7Z589 1322 aa22.31■■□□□ 1.16
LIME1-205ENST00000480139 LGALS2P05162 132 aa22.31■■□□□ 1.16
LIME1-205ENST00000480139 TOB1P50616 345 aaPredicted RBP22.31■■□□□ 1.16
LIME1-205ENST00000480139 SP4Q02446 784 aa22.31■■□□□ 1.16
LIME1-205ENST00000480139 B3GNT9Q6UX72 402 aa22.31■■□□□ 1.16
LIME1-205ENST00000480139 HAS1Q92839 578 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms