RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 LRFN2Q9ULH4 789 aa7.7□□□□□ -1.18
USP48-208ENST00000479177 FZD1Q9UP38 647 aa7.7□□□□□ -1.18
USP48-208ENST00000479177 PHF24Q9UPV7 400 aa7.7□□□□□ -1.18
USP48-208ENST00000479177 MTMR7Q9Y216 660 aa7.7□□□□□ -1.18
USP48-208ENST00000479177 TMX2Q9Y320 296 aa7.7□□□□□ -1.18
USP48-208ENST00000479177 LOC285556D6RIA3 1793 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 TRPM7Q96QT4 1865 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 UBE2Q2LH0YL09 131 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 USP2O75604 605 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 BRD1O95696 1058 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 NDUFB10O96000 172 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 GOLGA8HP0CJ92 632 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 BMP4P12644 408 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 PDCP20941 246 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 SYT1P21579 422 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 NF2P35240 595 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 ECE1P42892 770 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 NUCB2P80303 420 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 SSRP1Q08945 709 aaKnown RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 DOC2BQ14184 412 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 CCDC96Q2M329 555 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 MAP1SQ66K74 1059 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 CMTR1Q8N1G2 835 aaKnown RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 FAM184AQ8NB25 1140 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 ZNF526Q8TF50 670 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 CLP1Q92989 425 aaKnown RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 ZKSCAN4Q969J2 545 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 SPZ1Q9BXG8 430 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 RNF26Q9BY78 433 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 SAP130Q9H0E3 1048 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 SH2D4AQ9H788 454 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 VCPKMTQ9H867 229 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 CXXC1Q9P0U4 656 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 MTMR6Q9Y217 621 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 KIF3AQ9Y496 699 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
USP48-208ENST00000479177 FRMPD2Q68DX3 1309 aaPredicted RBP7.69□□□□□ -1.18
USP48-208ENST00000479177 PARP14Q460N5 1801 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 MYH15Q9Y2K3 1946 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 KLRF2D3W0D1 207 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 F5H6K3 240 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 TRAF5O00463 557 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 PRPF3O43395 683 aaKnown RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 CYTH3O43739 400 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 STX6O43752 255 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 DEXIO95424 95 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 PTPRAP18433 802 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 SMARCA1P28370 1054 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 IREB2P48200 963 aaKnown RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 TYRO3Q06418 890 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 KLRC3Q07444 240 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 DGKZQ13574 1117 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 PRKG1Q13976 671 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 VGLL4Q14135 290 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 PKN1Q16512 942 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 MAP3K11Q16584 847 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 KIAA1755Q5JYT7 1200 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 GPATCH4Q5T3I0 446 aaKnown RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 SLFN13Q68D06 897 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 VTI1AQ96AJ9 217 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 CEP63Q96MT8 703 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 AIFM3Q96NN9 605 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 FEZ1Q99689 392 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 KIAA1683Q9H0B3 1180 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 PICK1Q9NRD5 415 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 KLF15Q9UIH9 416 aa7.68□□□□□ -1.18
USP48-208ENST00000479177 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
USP48-208ENST00000479177 hCG_1642624A0A1W2PR95 340 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 VPS37CA5D8V6 355 aaPredicted RBP7.67□□□□□ -1.18
USP48-208ENST00000479177 ZSCAN22P10073 491 aaPredicted RBP7.67□□□□□ -1.18
USP48-208ENST00000479177 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
USP48-208ENST00000479177 AMPD1P23109 780 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 SLC1A4P43007 532 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 FAM26DQ5JW98 314 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 COX20Q5RI15 118 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 TTBK2Q6IQ55 1244 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 MOB2Q70IA6 237 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 BTLAQ7Z6A9 289 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 SPICE1Q8N0Z3 855 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 RGS22Q8NE09 1264 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 WASF1Q92558 559 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 SHISA4Q96DD7 197 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 C8orf76Q96K31 380 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 NUP88Q99567 741 aaPredicted RBP7.67□□□□□ -1.18
USP48-208ENST00000479177 SLC30A3Q99726 388 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 CPVLQ9H3G5 476 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 RIOX1Q9H6W3 641 aa7.67□□□□□ -1.18
USP48-208ENST00000479177 GPC6Q9Y625 555 aaPredicted RBP7.67□□□□□ -1.18
USP48-208ENST00000479177 RLFQ13129 1914 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 F13A1P00488 732 aa7.66□□□□□ -1.18
USP48-208ENST00000479177 BMP3P12645 472 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms