RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 SMCR8Q8TEV9 937 aaPredicted RBP11.67□□□□□ -0.54
MINDY3-206ENST00000477891 SCFD1Q8WVM8 642 aa11.67□□□□□ -0.54
MINDY3-206ENST00000477891 BAP1Q92560 729 aa11.67□□□□□ -0.54
MINDY3-206ENST00000477891 GMCL1Q96IK5 515 aa11.67□□□□□ -0.54
MINDY3-206ENST00000477891 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
MINDY3-206ENST00000477891 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
MINDY3-206ENST00000477891 MACROD2A1Z1Q3 448 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 LRRC53A6NM62 1247 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 APBA1Q02410 837 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 AP3B2Q13367 1082 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 ZBTB9Q96C00 473 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 UBXN6Q9BZV1 441 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 KCTD10Q9H3F6 313 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 POLD4Q9HCU8 107 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 RAB21Q9UL25 225 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 ABCB11O95342 1321 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 KDM3AQ9Y4C1 1321 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 BMP3P12645 472 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 CASP5P51878 434 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 BEND6Q5SZJ8 279 aaPredicted RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 PAPD7Q5XG87 772 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 PURBQ96QR8 312 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 NAP1L4Q99733 375 aaKnown RBP11.66□□□□□ -0.54
MINDY3-206ENST00000477891 TSG101Q99816 390 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 ZHX3Q9H4I2 956 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 EMILIN3Q9NT22 766 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 COL4A3BPQ9Y5P4 624 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 SAR1BQ9Y6B6 198 aa11.66□□□□□ -0.54
MINDY3-206ENST00000477891 TCP10L2B9ZVM9 353 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ZNF185O15231 689 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ATP8B1O43520 1251 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 IPO7O95373 1038 aaKnown RBP11.65□□□□□ -0.54
MINDY3-206ENST00000477891 VSNL1P62760 191 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 PABPC4Q13310 644 aaKnown RBP eCLIP11.65□□□□□ -0.54
MINDY3-206ENST00000477891 BRD3Q15059 726 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 MOXD1Q6UVY6 613 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 CRACR2AQ9BSW2 395 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ATRNL1Q5VV63 1379 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 SPDYE3A6NKU9 549 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 MSH4O15457 936 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 C21orf2O43822 256 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ENTPD3O75355 529 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 NOL4O94818 638 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 SREBF1P36956 1147 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 MMP14P50281 582 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 KIF11P52732 1056 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 VAV2P52735 878 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 KIF5AQ12840 1032 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 GIT2Q14161 759 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 Q4G0T1 1027 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 FOXR2Q6PJQ5 311 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 CAPZA3Q96KX2 299 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 ABCB6Q9NP58 842 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 PCDHA13Q9Y5I0 950 aa11.65□□□□□ -0.54
MINDY3-206ENST00000477891 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 FRMD3A2A2Y4 597 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 EML1O00423 815 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 PPIP5K2O43314 1243 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 RPA1P27694 616 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 SPA17Q15506 151 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 BTNL9Q6UXG8 535 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 HNRNPLLQ8WVV9 542 aaKnown RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 MLXIPQ9HAP2 919 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 SALL4Q9UJQ4 1053 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 PDE2AO00408 941 aaPredicted RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 MAP2K7O14733 419 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 TLR2O60603 784 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 LCA5LO95447 670 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 KRT18P05783 430 aaKnown RBP11.64□□□□□ -0.55
MINDY3-206ENST00000477891 POLD1P28340 1107 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 HOXD13P35453 343 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 ADAM9Q13443 819 aa11.64□□□□□ -0.55
MINDY3-206ENST00000477891 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms