RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 LRRC47Q8N1G4 583 aaKnown RBP5.15□□□□□ -1.59
CNTN3-202ENST00000477856 PNMA1Q8ND90 353 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 CTCFLQ8NI51 663 aaPredicted RBP5.15□□□□□ -1.59
CNTN3-202ENST00000477856 ACER1Q8TDN7 264 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 IGDCC4Q8TDY8 1250 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 CHMP4CQ96CF2 233 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 MAP3K14Q99558 947 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 UPF3BQ9BZI7 483 aaKnown RBP5.15□□□□□ -1.59
CNTN3-202ENST00000477856 TANGO6Q9C0B7 1094 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 ALDH8A1Q9H2A2 487 aaPredicted RBP5.15□□□□□ -1.59
CNTN3-202ENST00000477856 RPAP3Q9H6T3 665 aaPredicted RBP5.15□□□□□ -1.59
CNTN3-202ENST00000477856 LY9Q9HBG7 655 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 PDRG1Q9NUG6 133 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 SAGE1Q9NXZ1 904 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 SLC12A7Q9Y666 1083 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 MYPNQ86TC9 1320 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 PTPRFP10586 1907 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 MYH4Q9Y623 1939 aa5.15□□□□□ -1.59
CNTN3-202ENST00000477856 KLF18A0A0U1RQI7 1052 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 CCDC196A0A1B0GTZ2 297 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 GOLGA8BA8MQT2 603 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L15C9J2P7 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 BTBD19C9JJ37 291 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L13C9JLJ4 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L11C9JVI0 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L18D6R9N7 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L22D6RA61 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L17D6RBQ6 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L19D6RCP7 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L20D6RJB6 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 PDHXO00330 501 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 ZBTB43O43298 467 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 TRAK2O60296 914 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 PLA2G6O60733 806 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 AOC2O75106 756 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 PARP1P09874 1014 aaKnown RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 SNHG28P0DPA3 235 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 PDHBP11177 359 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 CPA1P15085 419 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 HOXA7P31268 230 aaPredicted RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 MCM2P49736 904 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 NEK4P51957 841 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 STAT2P52630 851 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 EVCP57679 992 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 IRX3P78415 501 aaPredicted RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 HTRA3P83110 453 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 KIF23Q02241 960 aaPredicted RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 MAP2K1Q02750 393 aaPredicted RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 USP17L24Q0WX57 530 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 TROAPQ12815 778 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 MOGSQ13724 837 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 NR6A1Q15406 480 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 CCDC96Q2M329 555 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 Q6ZUG5 572 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 FAM160B2Q86V87 743 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 DMRTC2Q8IXT2 367 aaPredicted RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 ZNF654Q8IZM8 581 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 SPICE1Q8N0Z3 855 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 EPS8L1Q8TE68 723 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 CHURC1Q8WUH1 139 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 BRI3BPQ8WY22 251 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 BRF1Q92994 677 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 LZTS2Q9BRK4 669 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 LRRC2Q9BYS8 371 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 AGXT2Q9BYV1 514 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 RBM28Q9NW13 759 aaKnown RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 FEM1BQ9UK73 627 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 ISY1Q9ULR0 285 aaKnown RBP5.14□□□□□ -1.59
CNTN3-202ENST00000477856 NID2Q14112 1375 aa5.14□□□□□ -1.59
CNTN3-202ENST00000477856 PALM3A6NDB9 673 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 IGF2BP3O00425 579 aaKnown RBP eCLIP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 DHX16O60231 1041 aaKnown RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 FLOT1O75955 427 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 CDKL5O76039 1030 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 PLA2G4AP47712 749 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 SCTRP47872 440 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 GCLCP48506 637 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 GNAQP50148 359 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 METAP2P50579 478 aaKnown RBP eCLIP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 ZNF543Q08ER8 600 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 TRAF1Q13077 416 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 IKQ13123 557 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 TOB2Q14106 344 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 COG2Q14746 738 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 GRM4Q14833 912 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 RTN1Q16799 776 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 FAM83BQ5T0W9 1011 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 TREML2Q5T2D2 321 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 APOA5Q6Q788 366 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 LBX2Q6XYB7 198 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 CATSPERGQ6ZRH7 1159 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 MICU3Q86XE3 530 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 MB21D1Q8N884 522 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 PRPF38AQ8NAV1 312 aaKnown RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 FANCBQ8NB91 859 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 SMCR8Q8TEV9 937 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 NUP133Q8WUM0 1156 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 ZNF274Q96GC6 653 aaPredicted RBP5.13□□□□□ -1.59
CNTN3-202ENST00000477856 TCEANC2Q96MN5 208 aa5.13□□□□□ -1.59
CNTN3-202ENST00000477856 KIF2CQ99661 725 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms