RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.36
NUP188-205ENST00000477069 NDST4Q9H3R1 872 aa12.77□□□□□ -0.36
NUP188-205ENST00000477069 STK24Q9Y6E0 443 aa12.77□□□□□ -0.36
NUP188-205ENST00000477069 LOXHD1Q8IVV2 1947 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 EFCAB8A8MWE9 144 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 KIF5CO60282 957 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 PSMC6P62333 389 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 HERVK_113P62684 666 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 SYT2Q8N9I0 419 aaPredicted RBP12.77□□□□□ -0.37
NUP188-205ENST00000477069 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 TBC1D5Q92609 795 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 SLF1Q9BQI6 1058 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 GLIS2Q9BZE0 524 aaPredicted RBP12.77□□□□□ -0.37
NUP188-205ENST00000477069 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
NUP188-205ENST00000477069 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.37
NUP188-205ENST00000477069 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
NUP188-205ENST00000477069 HNRNPH3P31942 346 aaKnown RBP12.76□□□□□ -0.37
NUP188-205ENST00000477069 MARSP56192 900 aaKnown RBP12.76□□□□□ -0.37
NUP188-205ENST00000477069 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 ERMNQ8TAM6 284 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 TSG101Q99816 390 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
NUP188-205ENST00000477069 MYO1AQ9UBC5 1043 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 EPHB6O15197 1021 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 GIT2Q14161 759 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 FKBP15Q5T1M5 1219 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 FAM160B2Q86V87 743 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 CHURC1Q8WUH1 139 aa12.76□□□□□ -0.37
NUP188-205ENST00000477069 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 EML1O00423 815 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
NUP188-205ENST00000477069 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
NUP188-205ENST00000477069 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
NUP188-205ENST00000477069 EPM2AIP1Q7L775 607 aaPredicted RBP12.75□□□□□ -0.37
NUP188-205ENST00000477069 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 PTGER2P43116 358 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 TGFB2P61812 414 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
NUP188-205ENST00000477069 PPP2R3AQ06190 1150 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 ZNF569Q5MCW4 686 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 SLC5A5Q92911 643 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 GCOM1H8Y6P7 765 aaPredicted RBP12.75□□□□□ -0.37
NUP188-205ENST00000477069 PSMD10O75832 226 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 POLR2MP0CAP2 368 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 MNS1Q8NEH6 495 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 FEZ1Q99689 392 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 TBC1D7Q9P0N9 293 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 COL4A3BPQ9Y5P4 624 aa12.75□□□□□ -0.37
NUP188-205ENST00000477069 MEIS1O00470 390 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 CFBP00751 764 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 CASP5P51878 434 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 ZNF280AP59817 542 aaPredicted RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 PPP2R5CQ13362 524 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 HSD17B14Q9BPX1 270 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 EIF2AK1Q9BQI3 630 aaKnown RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 REEP2Q9BRK0 252 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 NHEJ1Q9H9Q4 299 aaPredicted RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 PLAGL2Q9UPG8 496 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 DNM3Q9UQ16 869 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 ZNF536O15090 1300 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 ASNSP08243 561 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 CIAPIN1Q6FI81 312 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 BAP1Q92560 729 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 FBXO28Q9NVF7 368 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 ZNF446Q9NWS9 450 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
NUP188-205ENST00000477069 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 MRPL11Q9Y3B7 192 aaKnown RBP12.74□□□□□ -0.37
NUP188-205ENST00000477069 HOXD13P35453 343 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.37
NUP188-205ENST00000477069 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
NUP188-205ENST00000477069 EDRF1Q3B7T1 1238 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
NUP188-205ENST00000477069 UBXN4Q92575 508 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms