RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 NR2E1Q9Y466 385 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 EMSYQ7Z589 1322 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 ADGRA3Q8IWK6 1321 aa7.66□□□□□ -1.18
CLDN4-205ENST00000476494 MYH7BA7E2Y1 1941 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 F5H6K3 240 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 HAS3O00219 553 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 ZBED4O75132 1171 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 NDUFB10O96000 172 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 C1QTNF9P0C862 333 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 PDE4AP27815 886 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 ZAP70P43403 619 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 KLRC3Q07444 240 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 SOWAHCQ53LP3 525 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-205ENST00000476494 BMP2KLQ5H9B9 411 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 N4BP2L1Q5TBK1 243 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-205ENST00000476494 TTC41PQ6P2S7 1318 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 PLEKHM2Q8IWE5 1019 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 RASGRP4Q8TDF6 673 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 POF1BQ8WVV4 589 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 ZNF512BQ96KM6 892 aaPredicted RBP7.65□□□□□ -1.18
CLDN4-205ENST00000476494 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 TLE6Q9H808 572 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 HOMER2Q9NSB8 354 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 SWAP70Q9UH65 585 aa7.65□□□□□ -1.18
CLDN4-205ENST00000476494 BAZ2AQ9UIF9 1905 aaKnown RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 LAMA5O15230 3695 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 KRBA1A5PL33 1030 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 POTEMA6NI47 508 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 RSPH10B2B2RC85 870 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 TM4SF5O14894 197 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 NKRFO15226 690 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 ARIH2O95376 493 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 IFIT2P09913 472 aaKnown RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 RSPH10BP0C881 870 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 MX1P20591 662 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 CDK8P49336 464 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 MUM1L1Q5H9M0 696 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 CCDC62Q6P9F0 684 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 POTEGQ6S5H5 508 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 C1orf210Q8IVY1 113 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 LRRC47Q8N1G4 583 aaKnown RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 NELL1Q92832 810 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 BORCS6Q96GS4 357 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 DCP1AQ9NPI6 582 aaPredicted RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 RNF216Q9NWF9 866 aaPredicted RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 MCM9Q9NXL9 1143 aa7.64□□□□□ -1.19
CLDN4-205ENST00000476494 MRPL42Q9Y6G3 142 aaKnown RBP7.64□□□□□ -1.19
CLDN4-205ENST00000476494 SALL3Q9BXA9 1300 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 LOC102724159A0A0B4J2E5 919 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 SRRM3A6NNA2 597 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 FSCN2O14926 492 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 SMARCA5O60264 1052 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 KINO60870 393 aaKnown RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 LILRB5O75023 590 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 DGKIO75912 1065 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 MMP3P08254 477 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 HOXD8P13378 290 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 GLULP15104 373 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 EDNRBP24530 442 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 HOXC8P31273 242 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 ALDH5A1P51649 535 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 PDE1AP54750 535 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 ERVFC1P60507 584 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 TBC1D8BQ0IIM8 1120 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 PWP2Q15269 919 aaKnown RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 BRDTQ58F21 947 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 GORABQ5T7V8 394 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 SERINC5Q86VE9 423 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 TICAM2Q86XR7 235 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 SIX5Q8N196 739 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 AFG1LQ8WV93 481 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 SEPT8Q92599 483 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 KIFC2Q96AC6 838 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 TRERF1Q96PN7 1200 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 CDCA3Q99618 268 aaPredicted RBP7.63□□□□□ -1.19
CLDN4-205ENST00000476494 APOL5Q9BWW9 433 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 IL1RAPL2Q9NP60 686 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 ECHDC1Q9NTX5 307 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 RNF146Q9NTX7 359 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 NCDNQ9UBB6 729 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 DUSP12Q9UNI6 340 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 WASF3Q9UPY6 502 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 DENND4AQ7Z401 1863 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 IGSF10Q6WRI0 2623 aa7.63□□□□□ -1.19
CLDN4-205ENST00000476494 RALGAPA1Q6GYQ0 2036 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 MYH4Q9Y623 1939 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 HOXB8P17481 243 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-205ENST00000476494 TECP42680 631 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 TKFCQ3LXA3 575 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 ZNF528Q3MIS6 628 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 TNNI3KQ59H18 835 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 TTC22Q5TAA0 569 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 CASC1Q6TDU7 716 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 C16orf86Q6ZW13 317 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 AACSQ86V21 672 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 ZBTB44Q8NCP5 570 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 FEZF2Q8TBJ5 459 aa7.62□□□□□ -1.19
CLDN4-205ENST00000476494 NETO1Q8TDF5 533 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms