RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PTK7Q13308 1070 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 XRRA1Q6P2D8 792 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 COL25A1Q9BXS0 654 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-205ENST00000476387 MLXIPQ9HAP2 919 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 TRIP12Q14669 1992 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-205ENST00000476387 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
COL1A1-205ENST00000476387 TET1Q8NFU7 2136 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
COL1A1-205ENST00000476387 PPP2R2DQ66LE6 453 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
COL1A1-205ENST00000476387 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 CYP46A1Q9Y6A2 500 aa18.59■□□□□ 0.57
COL1A1-205ENST00000476387 VCANP13611 3396 aa18.58■□□□□ 0.57
COL1A1-205ENST00000476387 NID2Q14112 1375 aa18.58■□□□□ 0.57
COL1A1-205ENST00000476387 SPATA31C2B4DYI2 1134 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 hCG_1984214I3L0E3 225 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.56
COL1A1-205ENST00000476387 CXCL10P02778 98 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 CKBP12277 381 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 NAPAP54920 295 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 NEDD9Q14511 834 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 PCNX4Q63HM2 1172 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 METTL7BQ6UX53 244 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 ZNF713Q8N859 430 aaPredicted RBP18.58■□□□□ 0.56
COL1A1-205ENST00000476387 USP38Q8NB14 1042 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 C16orf70Q9BSU1 422 aa18.58■□□□□ 0.56
COL1A1-205ENST00000476387 MEIS2O14770 477 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 FIBPO43427 364 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 MYOGP15173 224 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 CDC27P30260 824 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 ADGRE1Q14246 886 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 GPNMBQ14956 572 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 TRIM71Q2Q1W2 868 aaKnown RBP18.57■□□□□ 0.56
COL1A1-205ENST00000476387 WWC2Q6AWC2 1192 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 ZFP91Q96JP5 570 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-205ENST00000476387 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 TM6SF1Q9BZW5 370 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
COL1A1-205ENST00000476387 V9GY48 417 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-205ENST00000476387 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
COL1A1-205ENST00000476387 SORBS3O60504 671 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 HOXC8P31273 242 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 KCNJ6P48051 423 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 FUT2Q10981 343 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 CNKSR3Q6P9H4 555 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 HERC6Q8IVU3 1022 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 SENP7Q9BQF6 1050 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 EHMT1Q9H9B1 1298 aa18.56■□□□□ 0.56
COL1A1-205ENST00000476387 FAM217BQ9NTX9 383 aaPredicted RBP18.56■□□□□ 0.56
COL1A1-205ENST00000476387 KIF28PB7ZC32 967 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 H3BRB1 525 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 NBNO60934 754 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 LGALS2P05162 132 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 CA3P07451 260 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 ADD1P35611 737 aaKnown RBP18.55■□□□□ 0.56
COL1A1-205ENST00000476387 UBE2SQ16763 222 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 TRAF7Q6Q0C0 670 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 NLRX1Q86UT6 975 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 SERINC5Q86VE9 423 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
COL1A1-205ENST00000476387 TUT1Q9H6E5 874 aaKnown RBP18.55■□□□□ 0.56
COL1A1-205ENST00000476387 RTEL1Q9NZ71 1219 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 TRANK1O15050 2925 aa18.55■□□□□ 0.56
COL1A1-205ENST00000476387 EFCAB14O75071 495 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 IGFBP4P22692 258 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 ADCY7P51828 1080 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 WDR5P61964 334 aaKnown RBP18.54■□□□□ 0.56
COL1A1-205ENST00000476387 ZNF200P98182 395 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-205ENST00000476387 AKAP17AQ02040 695 aaKnown RBP18.54■□□□□ 0.56
COL1A1-205ENST00000476387 CYFIP1Q7L576 1253 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 GIMAP8Q8ND71 665 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-205ENST00000476387 SYMPKQ92797 1274 aaKnown RBP18.54■□□□□ 0.56
COL1A1-205ENST00000476387 GPR20Q99678 358 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 BCAS3Q9H6U6 928 aa18.54■□□□□ 0.56
COL1A1-205ENST00000476387 EMSYQ7Z589 1322 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 ABHD14A-ACY1A0A1B0GW23 586 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 STXBP3O00186 592 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-205ENST00000476387 HIC1Q14526 733 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 ZNF618Q5T7W0 954 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 WNT8BQ93098 351 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 GPRASP2Q96D09 838 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 CDHR1Q96JP9 859 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 GLT8D2Q9H1C3 349 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 BARHL2Q9NY43 387 aa18.53■□□□□ 0.56
COL1A1-205ENST00000476387 ZNF215Q9UL58 517 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-205ENST00000476387 CAND2O75155 1236 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 SCG2P13521 617 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms