RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CSF2RBP32927 897 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 SLC7A5Q01650 507 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 EMC4Q5J8M3 183 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 FBXW10Q5XX13 1052 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 STEAP3Q658P3 488 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 MBLAC2Q68D91 279 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 VASNQ6EMK4 673 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 CEP68Q76N32 757 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 FBXO33Q7Z6M2 555 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 TRIM48Q8IWZ4 208 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 LARP4BQ92615 738 aaKnown RBP3.83□□□□□ -1.8
CCDC39-203ENST00000473854 ZNF703Q9H7S9 590 aaPredicted RBP3.83□□□□□ -1.8
CCDC39-203ENST00000473854 MMRN2Q9H8L6 949 aa3.83□□□□□ -1.8
CCDC39-203ENST00000473854 PEX11BO96011 259 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 LRG1P02750 347 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 RPS19P39019 145 aaKnown RBP3.82□□□□□ -1.8
CCDC39-203ENST00000473854 SCRN1Q12765 414 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 KCNAB2Q13303 367 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 MAMDC4Q6UXC1 1216 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 TMC5Q6UXY8 1006 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 ARRDC4Q8NCT1 418 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 IL17DQ8TAD2 202 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 KATNBL1Q9H079 304 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 OAZ3Q9UMX2 235 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 AKT3Q9Y243 479 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 GTF3C3Q9Y5Q9 886 aa3.82□□□□□ -1.8
CCDC39-203ENST00000473854 H7BY64 318 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 TADA3O75528 432 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 DGKIO75912 1065 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 KNG1P01042 644 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 CR2P20023 1033 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 MRPS21P82921 87 aaKnown RBP3.81□□□□□ -1.8
CCDC39-203ENST00000473854 ZMAT1Q5H9K5 638 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 CYP4F22Q6NT55 531 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 Q6ZSN1 163 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 ULK2Q8IYT8 1036 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 DTX3Q8N9I9 347 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 C19orf47Q8N9M1 422 aaKnown RBP3.81□□□□□ -1.8
CCDC39-203ENST00000473854 TTLL11Q8NHH1 800 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 FGD4Q96M96 766 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 CRBNQ96SW2 442 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 CARD11Q9BXL7 1154 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 MYOTQ9UBF9 498 aa3.81□□□□□ -1.8
CCDC39-203ENST00000473854 ANKRD34BA5PLL1 514 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 KRIT1O00522 736 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 NOP56O00567 594 aaKnown RBP3.8□□□□□ -1.8
CCDC39-203ENST00000473854 PLSCR1O15162 318 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 CUTAO60888 179 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 BMP5P22003 454 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 IL12RB1P42701 662 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 HHEXQ03014 270 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 GPR155Q7Z3F1 870 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 DIO2Q92813 273 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 SMOC1Q9H4F8 434 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 GPRC5CQ9NQ84 441 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 CYP26B1Q9NR63 512 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 PARPBPQ9NWS1 579 aa3.8□□□□□ -1.8
CCDC39-203ENST00000473854 REXO2Q9Y3B8 237 aaKnown RBP3.8□□□□□ -1.8
CCDC39-203ENST00000473854 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-203ENST00000473854 H0Y858 1186 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 CYP27B1O15528 508 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 RHOBTB3O94955 611 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 KCNH1O95259 989 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 BCL6P41182 706 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 ZNF143P52747 638 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-203ENST00000473854 COL9A2Q14055 689 aaPredicted RBP3.79□□□□□ -1.8
CCDC39-203ENST00000473854 INF2Q27J81 1249 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 FNDC7Q5VTL7 733 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 SND1Q7KZF4 910 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC39-203ENST00000473854 OR6P1Q8NGX9 317 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 CLIP3Q96DZ5 547 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 OR14A2Q96R54 314 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 EMC9Q9Y3B6 208 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
CCDC39-203ENST00000473854 FOXN1O15353 648 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 CDC14BO60729 498 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 ERCC3P19447 782 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 HIBADHP31937 336 aaKnown RBP3.78□□□□□ -1.8
CCDC39-203ENST00000473854 RUFY4Q6ZNE9 571 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 NLRP10Q86W26 655 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 BVESQ8NE79 360 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 SCYL1Q96KG9 808 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 NKX2-4Q9H2Z4 354 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 SLC2A4RGQ9NR83 387 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 TIMELESSQ9UNS1 1208 aa3.78□□□□□ -1.8
CCDC39-203ENST00000473854 MEFVO15553 781 aaPredicted RBP3.77□□□□□ -1.81
CCDC39-203ENST00000473854 CKMP06732 381 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ADRA1BP35368 520 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 KRTAP10-11P60412 298 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 LSAMPQ13449 338 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 ZNF627Q7L945 461 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 C14orf37Q86TY3 774 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 NPLOC4Q8TAT6 608 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 FRS2Q8WU20 508 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.77□□□□□ -1.81
CCDC39-203ENST00000473854 APBA2Q99767 749 aa3.77□□□□□ -1.81
CCDC39-203ENST00000473854 KCND1Q9NSA2 647 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms