RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 FKBP3Q00688 224 aaKnown RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 HLTFQ14527 1009 aaKnown RBP eCLIP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 CENPHQ9H3R5 247 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 PLAAQ9Y263 795 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 GOLGA6L10A6NI86 522 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 HMGB1P1B2RPK0 211 aaPredicted RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 NOL4O94818 638 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 MDH1P40925 334 aaKnown RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 HSPA2P54652 639 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 MAPKAPK5Q8IW41 473 aa15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 PRPF38AQ8NAV1 312 aaKnown RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 INPP4AQ96PE3 977 aaPredicted RBP15.67■□□□□ 0.1
NHLRC3-204ENST00000473371 MYO1FO00160 1098 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 SLC37A4O43826 429 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 TDP2O95551 362 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 SEC24CP53992 1094 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 SETQ01105 290 aaPredicted RBP15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 SLC18A3Q16572 532 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 CCDC91Q7Z6B0 441 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 BAG3O95817 575 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 HPDP32754 393 aaPredicted RBP15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 FNTAP49354 379 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 KLHL30Q0D2K2 578 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 DIXDC1Q155Q3 683 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 KCNK18Q7Z418 384 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 CCT8L2Q96SF2 557 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 PACSIN1Q9BY11 444 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 GEMIN8Q9NWZ8 242 aaKnown RBP15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 A0A087X0T9 212 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 FSBPO95073 299 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 FAM228BP0C875 321 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 EMC10Q5UCC4 262 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 USP38Q8NB14 1042 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 EYA3Q99504 573 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 UBA5Q9GZZ9 404 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 ADAMTS1Q9UHI8 967 aa15.66■□□□□ 0.1
NHLRC3-204ENST00000473371 MAST2Q6P0Q8 1798 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 COASYQ13057 564 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 ASIC2Q16515 512 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 MYCBPAPQ8TBZ2 947 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 CABS1Q96KC9 395 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 MYCBPQ99417 103 aaPredicted RBP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 TAF1DQ9H5J8 278 aaPredicted RBP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 ZNF287Q9HBT7 754 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 E7EVH7 732 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 KCNK3O14649 394 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 HOXA7P31268 230 aaPredicted RBP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 HSPA9P38646 679 aaKnown RBP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 HDLBPQ00341 1268 aaKnown RBP15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 RPS6KA1Q15418 735 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 FAM133AQ8N9E0 248 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 KANSL2Q9H9L4 492 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 TBC1D7Q9P0N9 293 aa15.65■□□□□ 0.1
NHLRC3-204ENST00000473371 FAM26FQ5R3K3 315 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 ARFGAP2Q8N6H7 521 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 C1orf131Q8NDD1 294 aaKnown RBP15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 EPS15P42566 896 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 ITGB3BPQ13352 177 aaPredicted RBP15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 PDIA5Q14554 519 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 PAGR1Q9BTK6 254 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 TMBIM4Q9HC24 238 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 PPANQ9NQ55 473 aaKnown RBP15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 PANK4Q9NVE7 773 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 ESYT2A0FGR8 921 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 TMEM119Q4V9L6 283 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 ZCWPW2Q504Y3 356 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 FOXR2Q6PJQ5 311 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 GPATCH11Q8N954 259 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 COA7Q96BR5 231 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 ISCUQ9H1K1 167 aa15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 BMP2KQ9NSY1 1161 aaPredicted RBP15.64■□□□□ 0.09
NHLRC3-204ENST00000473371 GCOM1H8Y6P7 765 aaPredicted RBP15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 MARCH6O60337 910 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 MYZAPP0CAP1 466 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 CDK8P49336 464 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 ADCY7P51828 1080 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 ERVK-9P63128 1117 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 GSTO1P78417 241 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 IFT88Q13099 833 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 YTHDF3Q7Z739 585 aaKnown RBP15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 CEP63Q96MT8 703 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 PLCB1Q9NQ66 1216 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 GNA14O95837 355 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 FAM107AO95990 144 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 PPARDQ03181 441 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms